Proteomics

Dataset Information

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N-glycoproteins have a major role in MGL binding to colorectal cancer cell lines


ABSTRACT: Colorectal cancer (CRC) is the second leading cause of cancer death worldwide due in part to a high proportion of patients diagnosed at advanced stages of the disease. For this reason, many efforts have been made towards new approaches for early detection and prognosis. Cancer-associated aberrant glycosylation, especially the Tn and STn antigens, can be detected using the macrophage galactose-type C-type lectin (MGL/CLEC10A/CD301), which has been shown to be a promising tool for CRC prognosis. We had recently identified the major MGL binding glycoproteins in two high MGL binding CRC cells lines, HCT116 and HT29. We investigated here the impact of N-linked and O-linked glycans carried by these proteins for the binding to MGL. In addition, we performed quantitative proteomics to study the major differences in proteins involved in glycosylation in these cells. Our results showed that N-glycans have a significant, previously underestimated, importance in MGL binding to CRC cell lines.

INSTRUMENT(S): Orbitrap Fusion Lumos

ORGANISM(S): Homo Sapiens (human)

TISSUE(S): Cell Culture

DISEASE(S): Colon Cancer

SUBMITTER: Yassene Mohammed  

LAB HEAD: Paul J. Hensbergen

PROVIDER: PXD020344 | Pride | 2020-08-10

REPOSITORIES: Pride

Dataset's files

Source:
Action DRS
HCT116_R1_F1_L20192000057a.raw Raw
HCT116_R1_F1_L20192000057a.tandem.pep.xml Pepxml
HCT116_R1_F2_L20192000058a.raw Raw
HCT116_R1_F2_L20192000058a.tandem.pep.xml Pepxml
HCT116_R1_F3_L20192000059a.raw Raw
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Publications

<i>N</i>-Glycoproteins Have a Major Role in MGL Binding to Colorectal Cancer Cell Lines: Associations with Overall Proteome Diversity.

Pirro Martina M   Mohammed Yassene Y   van Vliet Sandra J SJ   Rombouts Yoann Y   Sciacca Agnese A   de Ru Arnoud H AH   Janssen George M C GMC   Tjokrodirijo Rayman T N RTN   Wuhrer Manfred M   van Veelen Peter A PA   Hensbergen Paul J PJ  

International journal of molecular sciences 20200801 15


Colorectal cancer (CRC) is the second-leading cause of cancer death worldwide due in part to a high proportion of patients diagnosed at advanced stages of the disease. For this reason, many efforts have been made towards new approaches for early detection and prognosis. Cancer-associated aberrant glycosylation, especially the Tn and STn antigens, can be detected using the macrophage galactose-type C-type lectin (MGL/CLEC10A/CD301), which has been shown to be a promising tool for CRC prognosis. W  ...[more]

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