Proteomics

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Translatome and Translation Machinery Remodeling by eIF4A Inhibitors Mediates Antitumor Potency.


ABSTRACT: Protein synthesis-targeting agents against eIF4A activity, including rocaglates, are actively pursued as anticancer and antiviral therapies. Yet, their full effect on the translational landscape is unknown, especially with regards to up-regulated proteins and drug-activated translation factors that mediate rocaglates’ remarkable anticancer potency. Here, we investigated rocaglate-driven global translational remodeling in cancer cells. Proteomic translatome analysis by TMT-pulse-SILAC revealed an extensive repertoire of rocaglate-inducible proteins that regulate hitherto unrecognized mechanisms of cytotoxicity. As proof-of-concept, we show that GEF-H1 induction activates anti-survival RHOA/JNK signaling. Intriguingly, rocaglate responses persist in eIF4A-depleted cells. Global MATRIX survey of translation machinery adaptations to rocaglates revealed augmented translational activities of the general translation factor eEF1ε1, and the DEAD-box RNA helicase DDX17, which drive rocaglate-specific protein induction and drug response. This original unbiased proteomic interrogation of rocaglate-driven translational reprogramming transforms the current definition of rocaglates as one-dimensional eIF4A inhibitors to comprehensive remodelers of the protein synthesis landscape.

INSTRUMENT(S): LTQ Orbitrap Velos

ORGANISM(S): Homo Sapiens (human)

TISSUE(S): Cell Culture

SUBMITTER: Jonathan Krieger  

LAB HEAD: Jonathan H. Schatz

PROVIDER: PXD022556 | Pride | 2021-11-23

REPOSITORIES: pride

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Action DRS
David_Ho_Fraction_1.mgf Mgf
David_Ho_Fraction_1.raw Raw
David_Ho_Fraction_10.mgf Mgf
David_Ho_Fraction_10.raw Raw
David_Ho_Fraction_11.mgf Mgf
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Publications

Proteomics reveal cap-dependent translation inhibitors remodel the translation machinery and translatome.

Ho J J David JJD   Cunningham Tyler A TA   Manara Paola P   Coughlin Caroline A CA   Arumov Artavazd A   Roberts Evan R ER   Osteen Ashanti A   Kumar Preet P   Bilbao Daniel D   Krieger Jonathan R JR   Lee Stephen S   Schatz Jonathan H JH  

Cell reports 20211001 2


Tactical disruption of protein synthesis is an attractive therapeutic strategy, with the first-in-class eIF4A-targeting compound zotatifin in clinical evaluation for cancer and COVID-19. The full cellular impact and mechanisms of these potent molecules are undefined at a proteomic level. Here, we report mass spectrometry analysis of translational reprogramming by rocaglates, cap-dependent initiation disruptors that include zotatifin. We find effects to be far more complex than simple "translatio  ...[more]

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