Proteomics

Dataset Information

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PANNEXIN-1 CHANNEL REGULATES NUCLEAR CONTENT PACKAGING INTO APOPTOTIC BODIES AND THEIR SIZE


ABSTRACT: Apoptotic bodies (ApoBDs), which are large extracullular vesicles exclusively released by apoptotic cells, possess therapeutically exploitable properties including biomolecule loadability and transferability. However, current limited understanding of ApoBD biology has hindered its exploration for clinical use. Particularly, as ApoBD-accompanying cargoes (e.g. nucleic acids and proteins) have major influence on their functionality, further insights into the mechanism of biomolecule sorting into ApoBDs are critical to unleash their therapeutic potential. Previous studies suggested pannexin 1 (PANX1) channel, a negative regulator of ApoBD biogenesis, can modify synaptic vesicle contents. We also reported trovafloxacin (a PANX1 inhibitor) increasing proportion of ApoBDs containing DNA. Therefore, we sought to define the role of PANX1 in regulating the sorting of nuclear content into ApoBDs. Here, using flow cytometry and label-free quantitative proteomic analyses, we showed that targeting PANX1 activity during apoptosis, via either pharmacological inhibition or genetic disruption, resulted in enrichment of both DNA and nuclear proteins in ApoBDs that were unexpectedly smaller in size. Our data suggest that PANX1, besides being a key regulator of ApoBD formation, also functions as a negative regulator of nuclear content packaging and modulator of ApoBD size.

INSTRUMENT(S): Orbitrap Fusion Lumos

ORGANISM(S): Homo Sapiens (human)

TISSUE(S): T Cell, Cell Culture

SUBMITTER: Pamali Fonseka  

LAB HEAD: Suresh Mathivanan

PROVIDER: PXD023988 | Pride | 2021-04-08

REPOSITORIES: Pride

Dataset's files

Source:
Action DRS
200203_Pam_PF-364_UT_A1-1.raw Raw
200203_Pam_PF-364_UT_A1-2.raw Raw
200203_Pam_PF-364_UT_A1-3.raw Raw
200203_Pam_PF-364_UT_A1-4.raw Raw
200203_Pam_PF-364_UT_A1-5.raw Raw
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Publications

Pannexin-1 channel regulates nuclear content packaging into apoptotic bodies and their size.

Phan Thanh Kha TK   Fonseka Pamali P   Tixeira Rochelle R   Pathan Mohashin M   Ang Ching-Seng CS   Ozkocak Dilara Ceyda DC   Mathivanan Suresh S   Poon Ivan Ka Ho IKH  

Proteomics 20210419 13-14


Apoptotic bodies (ApoBDs), which are large extracellular vesicles exclusively released by apoptotic cells, possess therapeutically exploitable properties including biomolecule loadability and transferability. However, current limited understanding of ApoBD biology has hindered its exploration for clinical use. Particularly, as ApoBD-accompanying cargoes (e.g., nucleic acids and proteins) have major influence on their functionality, further insights into the mechanism of biomolecule sorting into  ...[more]

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