Proteomics

Dataset Information

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Cullin-independent recognition of HHARI substrates by a dynamic RBR catalytic domain


ABSTRACT: RING-Between-RING (RBR) E3 ligases mediate ubiquitin transfer through an obligate E3- ubiquitin thioester intermediately prior to substrate ubiquitination. While RBRs share a conserved catalytic module, substrate recruitment mechanisms remain enigmatic and the relevant domains have yet to be identified for any member of the class. Here we characterize the interaction between the auto-inhibited RBR, HHARI (AriH1), and its target protein, 4EHP, using a combination of XL-MS, HDX-MS, NMR, and biochemical studies. The results show that 1) a di-aromatic surface on the catalytic HHARI Rcat domain forms a binding platform for substrates and 2) a phospho-mimetic mutation on the auto-inhibitory Ariadne domain of HHARI promotes release and reorientation of Rcat for transthiolation and substrate modification. The findings represent the first identification of a direct binding interaction between a RING-Between-RING ligase and its substrate.

INSTRUMENT(S): Q Exactive HF

ORGANISM(S): Homo Sapiens (human)

SUBMITTER: Alex Zelter  

LAB HEAD: Rachel E. Klevit

PROVIDER: PXD030849 | Pride | 2023-05-24

REPOSITORIES: Pride

Dataset's files

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EH208a_raw.zip Other
EH208a_results.zip Other
EH208b_raw.zip Other
EH208b_results.zip Other
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Publications


RING-between-RING (RBR) E3 ligases mediate ubiquitin transfer through an obligate E3-ubiquitin thioester intermediate prior to substrate ubiquitination. Although RBRs share a conserved catalytic module, substrate recruitment mechanisms remain enigmatic, and the relevant domains have yet to be identified for any member of the class. Here we characterize the interaction between the auto-inhibited RBR, HHARI (AriH1), and its target protein, 4EHP, using a combination of XL-MS, HDX-MS, NMR, and bioch  ...[more]

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