Proteomics

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Functional biomarker which could be used to predict connective healing based on an Achilles Tendon Model


ABSTRACT: Healing process after connective tissues (CT) injury is complex but important as CT are critical for human moving, and patient outcome of CT injured patients is protracted with high individual variation. Specific markers which could be used for healing prognosis will be great help to monitor patient outcome, and furtherly improve target treatment and patient recovery. Although several common factors like age, gender and body mass index (BMI) were reported to predict ATR healing outcome [references], more specific markers which can be used as predictors of patient outcome after ATR are still lacking. Several biomarkers have been reported to associate with tendon healing, and indicated their relationship with patient outcome(1-4). These results highlight the potential of protein expression detection and analysis for tendon study in general and healing outcome prognosis in particular. Collagen type I (Col1a1) is the main component of Achilles tendon and plays vital role in tendon healing via involving in collagen fibrils production among tendon fibroblasts(5). Higher production of Col1a1 is associated with faster tendon repair(6), previous study on animal model reported the increased Col1a1 synthesis can exert a positive effect on tendon healing[?]. Thus, functional proteins with high impact on Col1a1 can be used not only to improve tendon healing, also can be as targets for healing improvement and outcome prediction. The proteome file of Achilles tendon which is important to increase understanding of tendon healing and help to identify accurate outcome-related biomarkers is however lagged behind. The identification of proteomic profile of Achilles tendon is very much limited in number of proteins and sample size(7-9), and is even few on human. Recent improvement in proteomic assay based on mass spectrometry (MS) made it possible to assemble the proteomic landscape of human tissues(10, 11) with high quality and sensitivity. To characterize the proteomic components in human Achilles tendon, we utilized biopsies from ATR patients with both good and poor 1-year healing outcome. A validated platform including quantitative MS and clinical database was used to identify proteomic landscape and potential bio-predictors of clinical outcome. Our study may provide a more comprehensive landscape of proteins for human Achilles tendon, as well as specific biomarkers which can be used for long term outcome prognosis after ATR.

INSTRUMENT(S): LTQ, LCQ Classic, Q Exactive HF

ORGANISM(S): Homo Sapiens (human)

TISSUE(S): Connective Tissue

SUBMITTER: Massimiliano Gaetani  

LAB HEAD: Junyu Chen

PROVIDER: PXD033163 | Pride | 2023-05-10

REPOSITORIES: Pride

Dataset's files

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Action DRS
2020520_HF2_01_Junyu_T18S.raw Raw
2020520_HF2_02_Junyu_T38S.raw Raw
2020520_HF2_03_Junyu_T46S.raw Raw
2020520_HF2_04_Junyu_T12S.raw Raw
2020520_HF2_05_Junyu_T15S.raw Raw
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Publications

eEF2 improves dense connective tissue repair and healing outcome by regulating cellular death, autophagy, apoptosis, proliferation and migration.

Chen Junyu J   Wang Jin J   Wu Xinjie X   Simon Nils N   Svensson Camilla I CI   Yuan Juan J   Hart David A DA   Ahmed Aisha S AS   Ackermann Paul W PW  

Cellular and molecular life sciences : CMLS 20230421 5


Outcomes following human dense connective tissue (DCT) repair are often variable and suboptimal, resulting in compromised function and development of chronic painful degenerative diseases. Moreover, biomarkers and mechanisms that guide good clinical outcomes after DCT injuries are mostly unknown. Here, we characterize the proteomic landscape of DCT repair following human Achilles tendon rupture and its association with long-term patient-reported outcomes. Moreover, the potential regulatory mecha  ...[more]

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