Proteomics

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Integrative Analysis of Transcriptome and Proteome for a new Rumen-derived Bacillus Licheniform in regulating microenvrionment Treating with Different Carbon Sources


ABSTRACT: Bacillus licheniformis (B. licheniformis) is a microorganism with a wide range of probiotic properties and applications. Isolation and identification of novel strains is a major aspect of microbial research. Besides, the role of different carbon sources affects B. licheniformis in regulating micro-environment and the mechanisms need to be further investigated. In this study, we first isolated and identified a new strain of B. licheniformis from bovine rumen fluid. Microcrystalline cellulose (MC) and cellobiose (CB) as the certain carbon sources to treat strain. Further, a combination of transcriptome and proteome analyses was used to different carbon sources effects. The results showed that B. licheniformis ABC transporter proteins, antibiotic synthesis, flagellar assembly, cellulase-related pathways and proteins were significantly up-regulated in the MC treatment compared to the CB treatment, and lactate metabolism was inhibited. In addition, MC was used as a certain carbon source to improve bacterial inhibition of B. licheniformis, its own disease resistance and to regulate the rumen micro-environment. In conclusion, our research provides a potential new probiotic for feed research and a theoretical basis for investigating the mechanisms by which bacteria respond to different carbon sources.

INSTRUMENT(S): Q Exactive

ORGANISM(S): Bacillus Licheniformis

TISSUE(S): Cell Culture

SUBMITTER: Yuchen Cheng  

LAB HEAD: Xiaofeng Xu

PROVIDER: PXD042310 | Pride | 2024-01-26

REPOSITORIES: Pride

Dataset's files

Source:
Action DRS
BP20011_CB_1.raw Raw
BP20011_CB_2.raw Raw
BP20011_CB_3.raw Raw
BP20011_MC_1.raw Raw
BP20011_MC_2.raw Raw
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Publications

Response of a new rumen-derived <i>Bacillus licheniformis</i> to different carbon sources.

Cheng Yuchen Y   Zhang Jie J   Ren Wenyi W   Zhang Lili L   Xu Xiaofeng X  

Frontiers in microbiology 20231101


<h4>Introduction</h4><i>Bacillus licheniformis</i> (<i>B. licheniformis</i>) is a microorganism with a wide range of probiotic properties and applications. Isolation and identification of novel strains is a major aspect of microbial research. Besides, different carbon sources have varying effects on <i>B. licheniformis</i> in regulating the microenvironment, and these mechanisms need to be investigated further.<h4>Methods</h4>In this study, we isolated and identified a new strain of <i>B. lichen  ...[more]

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