Proteomics

Dataset Information

0

Secretomics of sponge whole-body collapse


ABSTRACT: Sponges (Porifera) are early-branching Metazoa who do not posess muscles or neurons, however are able to undergo a whole-body movement that involves the closure of their canal system and collapse of an epithelial tent. In this study we profile proteomic responses of the freshwater sponge Spongilla lacustris during agitation induced movements to elucidate the early evolution of coordination. Results from Thermal Proteome Profiling (TPP) experiments of agitated sponges suggest active secretion during the movement. Here, we use tandem mass tag (TMT) labeling-based quantification of proteins in the medium to systematically measure quantitative differences of secretion before and after agitation induced movement. In total, 146 proteins were detected in the medium, 47 of which were significantly upregulated during the movement.

INSTRUMENT(S): Orbitrap Fusion Lumos

ORGANISM(S): Spongilla Lacustris

TISSUE(S): Whole Body

SUBMITTER: Frank Stein  

LAB HEAD: Detlev Arendt

PROVIDER: PXD044175 | Pride | 2024-01-04

REPOSITORIES: pride

Dataset's files

Source:
Action DRS
Lara_220123_S3053_IB_FR_peptidomics_sponges_SN_mech_TMT6_1-20_R1.raw Raw
metadata.csv Csv
philosopher_semitryptic.yml Other
philosopher_tryptic.yml Other
semitryptic_peptide.tsv Tabular
Items per page:
1 - 5 of 10

Similar Datasets

2024-01-04 | PXD044171 | Pride
2024-01-04 | PXD044169 | Pride
2024-02-28 | PXD038185 | Pride
2024-07-08 | PXD019811 | Pride
2023-10-24 | PXD043096 | Pride
2024-01-18 | PXD044722 | Pride
2023-01-01 | PXD035448 | Pride
2024-11-04 | PXD041082 | Pride
2019-09-25 | PXD013160 | Pride
2024-03-22 | PXD047762 | Pride