Proteomics

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Transcription factor EB sets the stage for fate decisions of antigen-primed B cells in the absence and presence of co-stimulation


ABSTRACT: Ligation of the B cell antigen receptor (BCR) initiates humoral immunity. However, mere BCR signaling without appropriate co-stimulation commits B cells to death rather than to differentiation into immune effector cells. How BCR activation depletes potentially autoreactive B cells while simultaneously primes for receiving rescue and differentiation signals from cognate T lymphocytes remains unknown. Here, using a mass spectrometry-based proteomic approach to identify cytosolic/nuclear shuttling elements, we uncover transcription factor EB (TFEB) as a central BCR-controlled rheostat that drives activation-induced apoptosis, and concurrently, promotes the reception of co-stimulatory rescue signals by supporting B cell migration and antigen presentation. CD40 co-stimulation prevents TFEB-driven cell death, while enhancing and prolonging TFEB’s nuclear residency, which hallmarks antigenic experience also of memory B cells. In mice, TFEB shapes the transcriptional landscape of germinal center B cells. Within the germinal center, TFEB facilitates the dark zone entry of light-zone-residing centrocytes through regulation of chemokine receptors and, by balancing the expression of Bcl-2/BH3-only family members, integrates antigen-induced apoptosis with T cell-provided CD40 survival signals. Thus, TFEB reprograms antigen-primed germinal center B cells for cell fate decisions.

INSTRUMENT(S): Q Exactive

ORGANISM(S): Mus Musculus (mouse)

TISSUE(S): B Cell

SUBMITTER: Christof Lenz  

LAB HEAD: Christof Lenz

PROVIDER: PXD054505 | Pride | 2024-08-08

REPOSITORIES: Pride

Dataset's files

Source:
Action DRS
MQSearch_2018_124_Triplex_Cytosol.zip Other
MQSearch_2018_124_Triplex_Nucleus.zip Other
MQSearch_2019_30_Triplex_Cytosol.zip Other
MQSearch_2019_30_Triplex_Nucleus.zip Other
M_Muenchhalfen_120419_020619_L06_R1_01.raw Raw
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