Proteomics

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The nuclear sulfenome of Arabidopsis: spotlight on histone acetyltransferase GCN5 regulation through functional thiols


ABSTRACT: In aerobic life forms, reactive oxygen species (ROS) are produced by the partial reduction of oxygen during energy-generating metabolic processes. In plants, ROS production increases during periods of both abiotic and biotic stress, severely overloading the antioxidant systems. Hydrogen peroxide (H2O2) plays a central role in cellular redox homeostasis and signaling by oxidising crucial cysteines to sulfenic acid, which is considered a biologically relevant post-translational modification (PTM). Until now, the impact of the nucleus on cellular redox homeostasis has been relatively unexplored. The regulation of histone-modifying enzymes by oxidative PTMs at redox-sensitive cysteine or tyrosine residues is particularly intriguing because it allows the integration of redox signaling mechanisms with chromatin control of transcriptional activity. One of the most extensively studied histone acetyltransferases is the conserved GENERAL CONTROL NONDEPRESSIBLE 5 (GCN5) complex. This study investigated the nuclear sulfenome in Arabidopsis thaliana by expressing a nuclear variant of the Yeast Activation Protein-1 (YAP1) probe and identified 225 potential redox-active proteins undergoing S-sulfenylation. Mass spectrometry analysis further confirmed the S-sulfenylation of GCN5 at cysteines 293, 368, and 400, and their functional significance and impact on the GCN5 protein-protein interaction network were assessed using cysteine-to-serine mutagenesis.

INSTRUMENT(S): Orbitrap Fusion Lumos

ORGANISM(S): Arabidopsis Thaliana (mouse-ear Cress)

SUBMITTER: Frank Van Breusegem  

LAB HEAD: Frank Van Breusegem

PROVIDER: PXD057987 | Pride | 2025-02-20

REPOSITORIES: pride

Dataset's files

Source:
Action DRS
EOS458_trypsin_all_LFQ.mzML Mzml
EOS458_trypsin_all_LFQ.mzid.gz Mzid
Recombinant_GCN5_1-100H2O2.raw Raw
Recombinant_GCN5_1-20H2O2.raw Raw
Recombinant_GCN5_1-5H2O2.raw Raw
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Publications

The nuclear sulfenome of Arabidopsis: spotlight on histone acetyltransferase GCN5 regulation through functional thiols.

De Smet Barbara B   Yang Xi X   Plskova Zuzana Z   Castell Carmen C   Fernández-Fernández Alvaro A   Dard Avilien A   Masood Jan J   Mhamdi Amna A   Huang Jingjing J   Vertommen Didier D   Chan Kai Xun KX   Pyr Dit Ruys Sébastien S   Messens Joris J   Kerchev Pavel I PI   Van Breusegem Frank F  

Journal of experimental botany 20241227


In aerobic life forms, reactive oxygen species (ROS) are produced by the partial reduction of oxygen during energy-generating metabolic processes. In plants, ROS production increases during periods of both abiotic and biotic stress, severely overloading the antioxidant systems. Hydrogen peroxide (H2O2) plays a central role in cellular redox homeostasis and signaling by oxidising crucial cysteines to sulfenic acid, which is considered a biologically relevant post-translational modification (PTM).  ...[more]

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