Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

RNA-seq in GR18 cell line to identify genes regulated by the Glucocorticoid Receptor

ABSTRACT: RNA-seq in GR18 cell line to identify genes regulated by the Glucocorticoid Receptor

PROVIDER: PRJEB26484 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	ERR2540260_1.fastq.gz	Fastqsanger.gz
	ERR2540260_2.fastq.gz	Fastqsanger.gz
	ERR2540261_1.fastq.gz	Fastqsanger.gz
	ERR2540261_2.fastq.gz	Fastqsanger.gz
	ERR2540262_1.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 12

Similar Datasets

RNA-seq in GR18 cell line to identify genes regulated by the Glucocorticoid Receptor

Project description:To identify the genes regulated by the Glucocorticoid Receptor (GR), we performed RNA-seq in GR18 cell line (derived from U2OS ATTC:HTB-96, stably transfected with an expression construct for GR), upon glucocorticoid (dexamethasone) or vehicle (ethanol) treatment.

2018-10-29 | E-MTAB-6738 | biostudies-arrayexpress

RNA-seq in GR18 cell line to identify genes regulated by the Glucocorticoid Receptor (24h treatment)

2019-03-11 | E-MTAB-7745 | biostudies-arrayexpress

RNA-seq in GR18 cell line to identify genes regulated by the Glucocorticoid Receptor (24h treatment)

Project description:RNA-seq in GR18 cell line to identify genes regulated by the Glucocorticoid Receptor (24h treatment)

| PRJEB31557 | ENA

synSTARR-seq with Glucocorticoid Receptor synthetic binding sites in GR18 cell line

Project description:We performed STARR-seq with synthetic libraries (synSTARR-seq) in GR18 cell line (derived from U2OS ATTC:HTB-96, stably transfected with an expression construct for GR), upon glucocorticoid (dexamethasone) or vehicle (ethanol) treatment. The synthetic libraries are variants of the glucocorticoid receptor binding sites (GBS). The "GBS half site" library contains 8 consecutive randomized nucleotides within the core binding sites, while the "Cgt/Sgk library" contains 5 consecutive randomized nucleotides on the flank of the GBS.

2018-10-29 | E-MTAB-6737 | biostudies-arrayexpress

synSTARR-seq with Glucocorticoid Receptor synthetic binding sites in GR18 cell line

Project description:synSTARR-seq with Glucocorticoid Receptor synthetic binding sites in GR18 cell line

| PRJEB26483 | ENA

ChIP-seq for H3K27ac in the GR18 cell line treated for 1.5 h with 1 µM dexamethasone

Project description:We performed ChIP-seq in the GR18 cell line (derived from U2OS ATTC:HTB-96, stably transfected with an expression construct for GR), upon glucocorticoid (dexamethasone)treatment for 90 minutes. Cells were cross-linked with 1% formaldehyde for 3 minutes.

2019-03-11 | E-MTAB-7747 | biostudies-arrayexpress

ATAC-seq in GR18 cell line comparing cells treated for 90 minutes with 1 micro molar dexamethasone with vehicle (ethanol) control-treated cells

Project description:We performed ATAC-seq in the GR18 cell line (derived from U2OS ATTC:HTB-96, stably transfected with an expression construct for GR), upon glucocorticoid (dexamethasone) or vehicle (ethanol) treatment for 90 minutes.

2019-03-11 | E-MTAB-7746 | biostudies-arrayexpress

Glucocorticoid receptor gene expression profiling (BeadArray) in IMR90 cell line

Project description:To identify the sequences responsible for recruitment of Glucocorticoid receptor (GR) to individual loci, we performed BeadArray gene expression analysis in IMR90 cell line (ATTC:CCL-186), upon glucocorticoid treatment.

2015-02-25 | E-MTAB-2954 | biostudies-arrayexpress

Glucocorticoid Receptor: MegaTrans Switching Mediates Repression of ER?-Regulated Transcriptional Program

Project description:Glucocorticoid Receptor: MegaTrans Switching Mediates Repression of ER?-Regulated Transcriptional Program

| PRJNA321833 | ENA

Chromatin immunoprecipitation and transcription of mouse liver in the presence or absence of exogenous glucocorticoid to identify direct targets of the glucocorticoid receptor

Project description:The purpose of this study was to identify direct targets of the glucocorticoid receptor (GR) using an orthogonal analysis. An expression study of mouse livers in the presence or absence of exogenous glucocorticoid complemented a genome-wide location analysis on chromatin from the same livers. These were hybridized to the BCBC Mouse PancChip 5.0 and the Mouse PromoterChip BCBC-3.0 respectively.

2007-09-14 | E-CBIL-38 | biostudies-arrayexpress

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data