Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

RNA-seq of human breast cancer cell lines: CAL120 MDAMB468 and BT549 incubated in DMEM-F12 and Plasmax in normoxia (21%O2) and hypoxia (0.1% O2)

ABSTRACT: RNA-seq of human breast cancer cell lines: CAL120 MDAMB468 and BT549 incubated in DMEM-F12 and Plasmax in normoxia (21%O2) and hypoxia (0.1% O2)

PROVIDER: PRJEB29886 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	ERR2929080_1.fastq.gz	Fastqsanger.gz
	ERR2929080_2.fastq.gz	Fastqsanger.gz
	ERR2929090_1.fastq.gz	Fastqsanger.gz
	ERR2929090_2.fastq.gz	Fastqsanger.gz
	ERR2929100_1.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 72

Similar Datasets

HeLa, ZBTB2-myc overexpression, 0.1% O2

Project description:HeLa, ZBTB2-myc overexpression, 0.1% O2

| PRJNA928321 | ENA

H. sapiens First trimester placental villous explant 0conditioned media; galectin-7/BSA treatment; 2% O2

Project description:Identification of factors in conditioned media of first-trimester placental villous explants. Explants were cultured under hypoxia (2% O2), 5% CO2 in serum-free DMEM/F12 and treated with recombinant galectin-7 (1ug/ml) or vehicle control (BSA) for 72h. Identification of factors in conditioned media of first-trimester placental villous explants. Explants were cultured under superoxia (20% O2), 5% CO2 in serum-free DMEM/F12 and treated with recombinant galectin-7 (1ug/ml) or vehicle control (BSA) for 72h.

2021-04-20 | PXD019331 | Pride

RNA-seq of human breast cancer cell lines: CAL120; MDAMB468 and BT549 incubated in DMEM-F12 and Plasmax in normoxia (21%O2) and hypoxia (0.1% O2)

Project description:To compare the effect of different culture media on gene expression in multiple cell lines under different oxygen availability.

2019-01-07 | E-MTAB-6647 | biostudies-arrayexpress

E-MTAB-6647

Project description:RNA-seq of human breast cancer cell lines: CAL120; MDAMB468 and BT549 incubated in DMEM-F12 and Plasmax in normoxia (21%O2) and hypoxia (0.1% O2)

2019-01-16 | E-MTAB-6647 | ExpressionAtlas

HeLa, ZBTB2-myc overexpression, 0.1% O2

Project description:In order to identify candidate genes regulated by ZBTB2 under hypoxia, we examined the genomic occupancy of myc-tagged ZBTB2 in HeLa cells incubated under 0.1% oxygen.

2023-06-08 | GSE223754 | GEO

Transcriptome analysis of BT549 cells overexpressing SNHG15

Project description:LncRNA SNHG15 is an oncogenic lncRNA in a variety of cancers including breast cancer, lung cancer, and hepatocellular carcinoma. To screen genes regulated by SNHG15, we performed RNA-seq with stable SNHG15-overexpression BT549 cells, using BT549-pcIP2 as control.

2023-06-08 | GSE220492 | GEO

BT549 cells with control or NFIL3 shRNA treatment

Project description:Transcriptional profiling with samples from BT549 cells that were infected with control or NFIL3 shRNA

2012-09-02 | GSE31425 | GEO

miR-200c induction in BT549 TNBC cells

Project description:We performed microarray analysis on BT549 cells that express miR-200c in a doxycycline (dox)-inducible manner from the miR-200c-TripZ system.

2017-12-20 | GSE108271 | GEO

BT549 cells with control or NFIL3 shRNA treatment

Project description:Transcriptional profiling with samples from BT549 cells that were infected with control or NFIL3 shRNA Two condition experiment: control (scr) shRNA (two replicates) and NFIL3 shRNA (two replicates)

2012-09-02 | E-GEOD-31425 | biostudies-arrayexpress

AS1842856 treatment in BT549 cells

Project description:AS1842856 treatment in BT549 cells

| PRJNA745342 | ENA