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RNA-sequencing of Clostridioides difficile WT and luxS mutant both during mono-culture biofilms and co-culture biofilms with Bacteroides fragilis

ABSTRACT: RNA-sequencing of Clostridioides difficile WT and luxS mutant both during mono-culture biofilms and co-culture biofilms with Bacteroides fragilis

PROVIDER: PRJEB30314 | ENA |

REPOSITORIES: ENA

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			Action	DRS
	ERR2991470_1.fastq.gz	Fastqsanger.gz
	ERR2991470_2.fastq.gz	Fastqsanger.gz
	ERR2991480_1.fastq.gz	Fastqsanger.gz
	ERR2991480_2.fastq.gz	Fastqsanger.gz
	ERR2991471_1.fastq.gz	Fastqsanger.gz

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RNA-sequencing of Clostridioides difficile WT and luxS mutant both during mono-culture biofilms and co-culture biofilms with Bacteroides fragilis

Project description:5 conditions for RNA-sequencing: Mono-culture biofilms of C. difficile WT, C. difficile luxS mutant (insertional ClosTron mutant as described in DOI: 10.1128/JB.01980-12), B. fragilis (PRJEB29695), and co-cultures biofilms of C. difficile WT and luxS mutant with B. fragilis. These were used to compare differences between C. difficile WT and luxS during mono-culture biofilms, as well transcriptomic differences for both C. difficile and B. fragilis during co-culture.

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