Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Arabidopsis radA mutant cpDNA

ABSTRACT: Study of the impact of the Arabidopsis thaliana radA mutant on cpDNA

PROVIDER: PRJEB40706 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	ERR4686480_1.fastq.gz	Fastqsanger.gz
	ERR4686480_2.fastq.gz	Fastqsanger.gz
	ERR4686393_1.fastq.gz	Fastqsanger.gz
	ERR4686393_2.fastq.gz	Fastqsanger.gz
	ERR4686394_1.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 12

Similar Datasets

Arabidopsis radA mutant cpDNA coverage

Project description:Study coverage of the Arabidopsis thaliana radA mutant on cpDNA

| PRJEB40831 | ENA

Arabidopsis radA mutant cpDNA recombination

Project description:Study recombination of the Arabidopsis thaliana radA mutant on cpDNA

| PRJEB40832 | ENA

Mnase-Seq study of Arabidopsis thaliana mutant chr5

Project description:Comparative study of nuclesome occupancy in Arabidopsis thaliana mutant chr5 and wild type strain.

2019-05-23 | GSE99639 | GEO

Arabidopsis thaliana mutant sr45-1 inflorescence protein TMT-6

Project description:Arabidopsis thaliana mutant sr45-1 has an altered flower shape. sr45 is a splicing regulator. In this study, we examined the proteins from inflorescence of sr45-1 mutant plants and wild-type. Wild type TMT labels: 126, 128, 130. sr45-1 TMT labels: 127, 129, 131.

2019-04-26 | MSV000083728 | MassIVE

Transcriptome of Arabidopsis thaliana mem1-1 mutant

Project description:Transcriptome of Arabidopsis thaliana mem1-1 mutant and Col-0 under normal and 200ppm MMS treatment conditions, respectively

2021-08-04 | GSE181302 | GEO

WGBS of Arabidopsis thaliana rll6 mutant

Project description:WGBS of Arabidopsis thaliana rll6 mutant

| PRJNA859377 | ENA

knock out mutant n575260-NAD biosynthesis in Arabidopsis : role of quinolinate phosphoribosyltransferase

Project description:rs11-01_nad - knock out mutant n575260 - Study of the impact of a deregulation in the NAD concentration in arabidopsis - Study of the biosynthesis of NAD in Arabidopsis. Involvment of QPRTgene using the knock out mutant N575260 from Salk.

2012-02-03 | GSE30976 | GEO

The differential proteome of Arabidopsis rhd2 mutant

Project description:The aim of this project is to exploit a shot gun proteomic analysis to better characterize Arabidopsis thaliana rhd2 mutant. The mutant shows a loss of function mutation in RBOHC, a gene encoding NADPH oxidase implicated in root hair elongation.

2024-09-24 | PXD038577 | Pride

Arabidopsis thaliana

Project description:Mnase-Seq study of Arabidopsis thaliana mutant chr5

| PRJNA389129 | ENA

Quantitative N-terminome of N-end rule mutant in Arabidopsis

Project description:According to the /N-end rule pathway, proteins with basic N-termini are targeted for degradation by the Arabidopsis thaliana E3 ligase, PROTEOLYSIS6 (PRT6). Here, we undertook a quantitative proteomics study of N-end rule mutant prt6, to investigate the impact of this pathway on the etiolated seedling. Isolation of N-terminal peptides using terminal amine isotope labelling of samples (TAILS) combined with Tandem mass tag (TMT) identified over 3000 unique N-termini. Trypsin and GluC have advantage of identification of Acetylated or neo-peptides respectively. Seed storage proteins and Cysteine proteins actives are differentially regulated in abundance in the prt6 mutants, which are represent downstream targets of transcription factors known to be N-end rule substrates.

2017-10-27 | PXD006450 | Pride

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data