Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

ScRNA-seq of stromal and immune cells in WT and TGFBR2 KO mice

ABSTRACT: ScRNA-seq of stromal and immune cells in WT and TGFBR2 KO mice

PROVIDER: PRJEB55182 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	ERR10031432_1.fastq.gz	Fastqsanger.gz
	ERR10031432_2.fastq.gz	Fastqsanger.gz
	ERR10031433_1.fastq.gz	Fastqsanger.gz
	ERR10031433_2.fastq.gz	Fastqsanger.gz
	ERR10031434_1.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 8

Similar Datasets

mRNA-seq of WT and Tgfbr2 KO CD8 T cells transferred into chronically infected mice

Project description:This experiment was performed to examine transcriptional differences between WT and Tgfbr2 KO antigen-specific CD8 cells activated in established chronic infection.

2022-08-09 | GSE209577 | GEO

mRNA-seq of Tgfbr2 KO CD8 T cells (d8/d15)

Project description:This experiment was performed to examine transcriptional differences between differentiated (Tim3+) and stem-like (CXCR5+) WT vs. Tgfbr2 KO antigen-specific CD8 cells.

2022-08-09 | GSE209598 | GEO

mRNA-seq of Tgfbr2 KO CD8 T cells (d30)

Project description:This experiment was performed to examine transcriptional differences between differentiated (Tim3+) and stem-like (CXCR5+) WT vs. Tgfbr2 KO antigen-specific CD8 cells at day 30 after LCMV clone 13 infection.

2022-08-09 | GSE209590 | GEO

ScRNA-seq of stromal and immune cells in WT and TGFBR2 KO mice

Project description:Single-cell RNA-seq in mice with subcutaneous tumors was used to determine if TGFβR2 signaling in DPT+ universal fibroblasts drives LRRC15+ myofibroblast differentiation using DptIresCreERT2Tgfbr2fl/fl and WT control mice.

2022-08-16 | E-MTAB-12028 | biostudies-arrayexpress

Streptococcus pneumoniae membrane proteomics of WT and scRNA mutants

Project description:We studied the membrane protein compositions of Streptococcus pneumoniae WT and scRNA mutant strains, with or without the CSP1 induction into competence state.

2024-08-19 | PXD054463 | Pride

mRNA-seq of WT and Tgfbr2 KO CD8 T cells transferred into chronically infected mice

Project description:mRNA-seq of WT and Tgfbr2 KO CD8 T cells transferred into chronically infected mice

| PRJNA861280 | ENA

ScRNA-seq of stromal cells in WT and LRRC15 DTR mice

Project description:ScRNA-seq of stromal cells in WT and LRRC15 DTR mice

| PRJEB55257 | ENA

mRNA-seq of Tgfbr2 KO CD8 T cells (d30)

Project description:mRNA-seq of Tgfbr2 KO CD8 T cells (d30)

| PRJNA861296 | ENA

Single-Cell Transcriptomic Profiling of colonic wounds and intact tissues in Hgfac WT and KO mice

Project description:Wound healing is orchestrated by a spatial and temporal network of intercellular communication between epithelial cells, the stromal compartment, and the immune system. We found that Hgfac KO mice showed delayed wound healing in an endoscopic wound model. To dissect the celluar and molecular mechanisms of tissue healing, we collected tissues from day2 wounds or intact tissues from Hgfac WT and KO mice using a skin biopsy punch and dissociated cells for scRNA-seq analysis.

2023-10-26 | GSE235741 | GEO

scRNA-seq of lung stromal cells (CD45-CD31-CD326-) from C57BL/6J mice

Project description:To investigate the heterogeneity of lung stromal cells and identify the specific lung stromal subset, we performed single cell RNA-sequencing (scRNA-seq) on lung stromal cells (CD45-CD31-CD326-). Around 6800 cells were captured using the 10x Chromium technology.

2022-07-19 | E-MTAB-11879 | biostudies-arrayexpress

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data