Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Gene expression of MC38 tumor tissues from PBS, VNP20009 and HCS1-treated mice.

ABSTRACT: Gene expression of MC38 tumor tissues from PBS, VNP20009 and HCS1-treated mice.

PROVIDER: PRJNA1020834 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR26170913_1.fastq.gz	Fastqsanger.gz
	SRR26170913_2.fastq.gz	Fastqsanger.gz
	SRR26170914_1.fastq.gz	Fastqsanger.gz
	SRR26170914_2.fastq.gz	Fastqsanger.gz
	SRR26170915_1.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 24

Similar Datasets

Transcriptome of tumor tissues from MC38 bearing mice

Project description:Transcriptome of tumor tissues from MC38 bearing mice Transcriptome

| PRJNA1044251 | ENA

Nanostring analysis of MC38 tumors in PBS and hetIL-15-treated mice

Project description:Nanostring analysis of MC38 tumors in PBS and hetIL-15-treated mice

| PRJNA631901 | ENA

RNA-Seq of GB2-treated and untreated MC38 tumors

Project description:MC38 tumors from C57BL/6 mice treated with GB2 or PBS were collected and then the total RNA was isolated. After removal of the remaining genomic DNA, MRNA was purified from total RNA using polyT and then fragmented with 10x RNA fragmentation buffer and the RNA-seg library was constructed using Hieff NGS Ultima Dual-mode mRNA Library Prep Kit and was sequenced.

2024-12-20 | GSE251810 | GEO

RNA-seq analysis of mouse NSCLC tissues in the PBS, Taraxasterol (Tara), DC tumor vaccine and Taraxasterol combined with DC tumor vaccine group

Project description:Purpose:gene discrepancy analysis and signaling pathway of tumor tissues in the PBS, Taraxasterol, DC tumor vaccine and Taraxasterol combined with DC tumor vaccine group

2024-08-01 | GSE245586 | GEO

Gene expression of MC38 tumor tissues from WT or TLR4 deletion mice during Salmonella treatment.

Project description:To investigate the function of host TLR4 in Salmonella-mediated cancer therapy, we established MC38 tumor-bearing WT and TLR4 deletion mice for Salmonella treatment.

2023-09-11 | GSE229231 | GEO

The early effects of radiotherapy on gene expression in RM9 and MC38 tumor tissues.

Project description:To investigate irradiation-induced gene expression profile changes in the tumor microenvironment with a focus on DNA sensing pathways and CXCL/CXCR2 axis at early time points (3h, 12h, 24h) after irradiation. We then performed gene expression profiling analysis using data obtained from 4 tumor tissue from different mice at each time points and the unirradiated control group in both RM9 and MC38 tumor models.

2023-12-01 | GSE242237 | GEO

TMT-proteomics of sorted MC38+ tumor cells with high-fat diet

Project description:Obesity is a major cancer risk factor, but the underlying molecular mechanisms are not always known. In this study, we look at proteome remodeling in cancer cells with obesity, comparing tumor cells sorted from mice fed high-fat versus control diet. We conducted 10-plex TMT-proteomics on GFP+ MC38 colorectal adenocarcinoma tumor cells, sorted from subcutaneously implanted tumors 12 days after implantation. This study reveals molecular pathways that change in cancer cells with obesity that promote tumor growth.

2020-12-16 | PXD019495 | Pride

The early effects of radiotherapy on gene expression in RM9 and MC38 tumor tissues.

Project description:The early effects of radiotherapy on gene expression in RM9 and MC38 tumor tissues.

| PRJNA1012467 | ENA

Single cell TCR-seq profiling of T cells isolated from LNs of MC38 tumor-bearing mice

Project description:We investigate the single-cell landscape of the inflammatory mouse tumor model MC38, a C57BL/6 tumor cell line derived from colon adenocarcinoma. MC38 (diluted in HBSS and matrigel) was inoculated in the right unilateral flank (in the border of positions B2 and B3) of C57BL/6 mice (ref Study 16-3384 AV). Draining lymph nodes were taken one day after group-out (average 150-250 mm3 tumor size at day 0), approximately 14-19 days. Draining lymph nodes were dissociated and flow sorted accordingly to obtain the cells for 10x Chromium 5' Gene Expression Profiling and TCR sequencing.

2022-08-16 | E-MTAB-9734 | biostudies-arrayexpress

Single cell RNA-seq profiling of T cells isolated from LNs of MC38 tumor-bearing mice

2021-02-16 | E-MTAB-9274 | biostudies-arrayexpress