Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Solanum lycopersicum

ABSTRACT: transcriptom analysis of tomato after Citric acid-Formamide-CDs treatment

PROVIDER: PRJNA1056546 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR28129735_1.fastq.gz	Fastqsanger.gz
	SRR28129735_2.fastq.gz	Fastqsanger.gz
	SRR28129736_1.fastq.gz	Fastqsanger.gz
	SRR28129736_2.fastq.gz	Fastqsanger.gz
	SRR28129737_1.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 12

Similar Datasets

Solanum lycopersicum

Project description:Transcriptome analysis of tomato in response to treatment with neutralized phosphorous acid (NPA)

| PRJNA173208 | ENA

Solanum lycopersicum

Project description:Whole genome tomato transcriptional response to jasmonic acid treatment and Tetranychus urticae herbivory [def-1]

| PRJNA260190 | ENA

Solanum lycopersicum Transcriptome or Gene expression

Project description:To characterize the PTI response of tomato and the effect of the delivery of a subset of effectors, we performed an RNA-seq analysis of tomato Rio Grande prf3 leaves challenged with either the flgII-28 peptide or the following bacterial strains: Agrobacterium tumefaciens GV2260, Pseudomonas fluorescens 55, Pseudomonas putida KT2440, Pseudomonas syringae pv. tomato (Pst) DC3000, Pst DC3000 deltahrcQ-U deltafliC and Pst DC3000 deltaavrPto deltaavrPtoB. NOTE: Samples in SRA were assigned the same sample accession. This is incorrect as there are different samples, hence âSource Nameâ was replaced with new values. Comment[ENA_SAMPLE] contains the original SRA sample accessions.

2013-08-21 | E-MTAB-4789 | biostudies-arrayexpress

Solanum lycopersicum

Project description:Tomato root culture and Al treatment

| PRJNA105907 | ENA

Solanum lycopersicum

Project description:Tomato RNA-seq analysis

| PRJDB5790 | ENA

Solanum lycopersicum

Project description:Transcriptome analysis in primed tomato seeds with enhanced longevity by heat shock treatment

| PRJNA562700 | ENA

iSB09 elicits ABA-responsive gene expression in Solanum lycopersicum seedlings

Project description:To compare the genome-wide transcriptional effect of ABA and iSB09 in tomato plants, we performed RNA-seq analysis of mock-, 10 uM ABA- or 20 uM iSB09-treated plants. Differential gene expression analysis between mock- and ABA-treated or iSB09-treated seedlings was done with DESeq2 and genes with an absolute value of log2 fold change (log2FC) > 1 or (log2FC) < -1 and p-adjusted value (padj) < 0.05 were selected. iSB09 upregulated and downregulated genes represent a subset of the ABA-responsive genes, which reflects the activation of PYL1-like and PYL4-like ABA receptors in tomato seedlings.

2024-07-22 | GSE256238 | GEO

Solanum lycopersicum

Project description:Comparative gene expression analysis in fruits of a tomato introgression line performing higher ascorbic acid content

| PRJNA122043 | ENA

Solanum lycopersicum

Project description:Transcriptome analysis of the grafting tomato

| PRJDB9192 | ENA

Solanum lycopersicum

Project description:Transcriptomic analysis of parthenocarpic tomato fruit

| PRJNA692458 | ENA