Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Ovis aries isolate:Xinjiang | breed:Hetian sheep | cultivar:local breed

ABSTRACT: the transcriptome raw sequence reads of the skin hair follicle tissue of the Hetian sheep

PROVIDER: PRJNA1095361 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR28536888_1.fastq.gz	Fastqsanger.gz
	SRR28536888_2.fastq.gz	Fastqsanger.gz
	SRR28536889_1.fastq.gz	Fastqsanger.gz
	SRR28536889_2.fastq.gz	Fastqsanger.gz
	SRR28536890_1.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 12

Similar Datasets

Ovis aries breed:sheep

Project description:Identification and characterization of transcriptomes in the skin during the wool follicle development of Aohan fine wool sheep

| PRJNA595784 | ENA

Ovis aries strain:Subo mernio | breed:Mernio sheep

Project description:Comprehensive analysis of circRNAs during Merino sheep hair follicle development

| PRJNA705547 | ENA

Ovis aries strain:Subo mernio | breed:Mernio sheep

Project description:Comprehensive analysis of methylome during Merino sheep hair follicle development

| PRJNA705405 | ENA

Ovis aries strain:Subo mernio | breed:Mernio sheep

Project description:Comprehensive analysis of miRNAs during Merino sheep hair follicle development

| PRJNA705552 | ENA

Transcriptome sequencing of Ovis aries

2014-06-06 | GSE56643 | GEO

Transcriptome sequencing of Ovis aries

Project description:We have completed the high quality reference genome for domestic sheep (Oar v3.1) and performed a detailed survey of gene expression across different tissues. RNA-seq data of 7 tissue types from the reference female Texel and skin tissue from a Gansu alpine fine wool sheep were sequenced. Here is the part of the RNA-seq data sequenced in BGI, including 7 tissue types from the reference female Texel and skin type from a Gansu alpine fine wool sheep.

2014-06-06 | E-GEOD-56643 | biostudies-arrayexpress

Exploring the transcriptomic pattern in two kind of sheep skin with remarkable phenotype differences on wool

Project description:We report the application of High throughout sequencing to explore the differences of skin between Super Merino sheep(SM) and Small Tail Han sheep, which have remarkable phenotype differences on wool and hair follicle traits. We analysed the expression data by CLC genomic workbench 9.0 software. We find there are 435 differential expressional genes (DEGs) (127 were up-regulated and 308 were down-regulated) when STH sheep as control group. Some hair follicle KRTs, KAPs genes and hair follicle stem cells marker genes, were up-regulated in SM sheep. However, some of mammalian epidermal development complex (EDC) family genes were up-regulated in STH sheep. The GO and gene network analysis shown high expression genes in SM sheep enriched on type I interferon, lipid/fatty acid synthesis metabolism. This study provide more details in skin which control the development of follicle and wool in sheep.

2017-11-16 | GSE95785 | GEO

Ovis aries strain:Subo mernio | breed:Mernio sheep

Project description:Comprehensive analysis of long non-coding RNAs and mRNAs during Merino sheep hair follicle development

| PRJNA705554 | ENA

Ovis aries breed:sheep

Project description:Ovis aries breed:sheep Genome sequencing

| PRJNA885054 | ENA

Ovis aries breed:sheep

Project description:Ovis aries breed:sheep clean sequence reads

| PRJNA616111 | ENA