Arabidopsis thaliana
Ontology highlight
ABSTRACT:
PROVIDER: PRJNA200728 | ENA |
REPOSITORIES: ENA
Similar Datasets
Project description:To understand the role of acetic acids in drought tolerance, we have employed transcriptional profiling of plants treated with (or without) acetic acid and subsequent drought treatments. Agilent-021169 Arabidopsis 4 Oligo Microarray (V4) were used. Arabidopsis Col-0 were grown in soil for 2 weeks (16 hours light / 8 hours dark). 10mM acetic acid was supplied for 9 days. For drought-treated samples, the plants were subjected to drought by withholding water supply for indicated days. Then total RNA was prepared from the aboveground tissue and used for the microarray hybridization. Three replicative hybridization experiments for each array were carried out using the independent biological samples.
2017-04-29 | E-GEOD-46524 | biostudies-arrayexpress
Project description:To understand the role of acetic acids in drought tolerance, we have employed transcriptional profiling of plants treated with (or without) acetic acid and subsequent drought treatments. Agilent-021169 Arabidopsis 4 Oligo Microarray (V4) were used.
2017-04-29 | GSE46524 | GEO
Project description:Changes in histone H4 acetylation of Arabidopsis thaliana (Col-0) by treatment with acetic acid.
2017-04-03 | GSE95817 | GEO
Project description:Arabidopsis: Control- vs. acetic acid treatment
| PRJNA140261 | ENA
Project description:The aim of this study was to analyze the impact of autotetraploidy on gene expression in Arabidopsis thaliana by comparing diploid versus tetraploid transcriptomes. In particular, this included the comparison of the transcriptome of different tetraploid A. thaliana ecotypes (Col-0 vs. Ler-0). The study was extended to address further aspects. One was the comparison of the transcriptomes in subsequent generations. This intended to obtain information on the genome wide stability of autotetraploid gene expression. Another line of work compared the transcriptomes of different diploid vs. tetraploid tissues. This aimed to investigate whether particular gene groups are specifically affected during the development of A. thaliana autotetraploids. Samples 1-8: Arabidopsis thaliana Col-0 tetraploid transcriptome. Transcriptional profiling and comparison of diploid vs. tetraploid Col-0 seedlings. The experiment was carried out with pedigree of independently generated and assessed tetraploid Col-0 lines. Samples 9-12: Arabidopsis thaliana Ler-0 tetraploid transcriptome. Transcriptional profiling and comparison of diploid vs. tetraploid Ler-0 seedlings. The experiment was carried out with pedigree of independently generated and assessed tetraploid Ler-0 lines. Samples 13-24: Arabidopsis thaliana Col-0 tetraploid transcriptome. Transcriptional profiling and comparison of diploid vs. tetraploid Col-0 leaves (6th - 8th). The experiment was carried out with pedigree of independently generated and assessed tetraploid Col-0 lines. Samples 25-32: Arabidopsis thaliana Ler-0 tetraploid transcriptome. Transcriptional profiling and comparison of diploid vs. tetraploid Ler-0 leaves (6th - 8th). The experiment was carried out with pedigree of independently generated and assessed tetraploid Ler-0 lines. Samples 33-36: Arabidopsis thaliana Ler-0 tetraploid transcriptome. Transcriptional profiling and comparison of tetraploid vs. tetraploid Ler-0 seedlings from the second (F2) and third (F3) generation after induction, respectively. The experiment was carried out with pedigree of independently generated and assessed tetraploid Ler-0 lines. Samples 37-40: Arabidopsis thaliana Col-0 tetraploid transcriptome. Transcriptional profiling and comparison of tetraploid vs. tetraploid Col-0 seedlings from the second (F2) and third (F3) generation after induction, respectively. The experiment was carried out with pedigree of independently generated and assessed tetraploid Col-0 lines. Samples 41-44: Arabidopsis thaliana Col-0/Ler-0 diploid transcriptome. Transcriptional profiling and comparison of diploid Col-0 vs. diploid Ler-0 seedlings. The experiment was carried out with pedigree of esrablished lines. Samples 45-48: Arabidopsis thaliana Col-0/Ler-0 tetraploid transcriptome. Transcriptional profiling and comparison of tetraploid Col-0 vs tetraploid Ler-0 seedlings. The experiment was carried out with pedigree of independently generated and assessed tetraploid Col-0 and Ler-0 lines.
2010-05-01 | GSE18482 | GEO
Project description:Exogenous slaicylic acid (SA) treatment of Arabidopsis thaliana Col-0
| PRJNA149145 | ENA
Project description:Arabidopsis hsi2 vs. Col-0 Drought Arrays
| PRJNA170687 | ENA
Project description:Transcriptional profiling of Arabidopsis thaliana cotyledons comparing ecotype Col-0 (Control) with lea13 T-DNA line to elucidate the response mechanism to drought stress conditions that rely on LEA protein function.
2021-01-15 | GSE160866 | GEO
Project description:Expression data in Arabidopsis Col-0 with cold acclimation (CA) treatment and subsequent cold deacclimation (DA) treatment.
| PRJNA214936 | ENA
Project description:Transcriptome of Arabidopsis thaliana mem1-1 mutant and Col-0 under normal and 200ppm MMS treatment conditions, respectively
2021-08-04 | GSE181302 | GEO