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Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819

ABSTRACT: Refined analysis of the Campylobacter jejuni iron-dependent/independent Fur- and PerR-transcriptomes

PROVIDER: PRJNA255798 | ENA |

REPOSITORIES: ENA

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			Action	DRS
	SRR1525670_1.fastq.gz	Fastqsanger.gz
	SRR1525670_2.fastq.gz	Fastqsanger.gz
	SRR1525680_1.fastq.gz	Fastqsanger.gz
	SRR1525680_2.fastq.gz	Fastqsanger.gz
	SRR1525661_1.fastq.gz	Fastqsanger.gz

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RNA-sequencing of Campylobacter jejuni NCTC 11168 wildtype and fur perR mutant

2014-07-01 | GSE49687 | GEO

RNA-sequencing of Campylobacter jejuni NCTC 11168 wildtype and fur perR mutant

Project description:We report the use of RNA-seq analysis for the determination of RPKM transcript levels in wildtype and fur perR mutant of Campylobacter jejuni NCTC 11168. This allows for comparison of gene expression levels. Campylobacter jejuni NCTC 11168 wildtype and fur perR mutant were grown to late log phase, RNA was purified and used for RNA-sequencing by Illumina HiSeq sequencing

2014-07-01 | E-GEOD-49687 | biostudies-arrayexpress

Campylobacter jejuni comparative genome: control strain C. jejuni subsp. jejuni ATCC 700819 (NCTC 11168) vs. 12 other strains

Project description:Gene content comparison of control C. jejuni subsp. jejuni strain 11168 which colonizes and causes disease in C57BL/6 IL-10-/- mice versus C. jejuni strains D6844, D6845, D6846, D6847, D6848, D6849, D0121, D0835, D2586, D2600,33560 and NW in the C57BL/6 IL-10-/- mice. Keywords: DNA/DNA comparison

2010-10-21 | GSE24764 | GEO

Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819

Project description:The transcriptional landscape of Campylobacter jejuni under iron replete and iron limited growth conditions

| PRJNA211829 | ENA

Campylobacter jejuni comparative genome: control strain C. jejuni subsp. jejuni ATCC 700819 (NCTC 11168) vs. 12 other strains

2010-10-21 | E-GEOD-24764 | biostudies-arrayexpress

Global transcriptional analysis of Campylobacter jejuni NCTC 11168 in response to epinephrine and norepinephrine.

Project description:During colonization in the host gastrointestinal tract, the enteric bacteria Campylobacter jejuni is exposed to a variety of signaling molecules including the catecholamine hormones epinephrine (Epi) and norepinephrine (NE). NE has been determined to stimulate the growth of C. jejuni as well as increase its pathogenicity. To investigate the mechanisms of NE or Epi on the biology of C. jejuni, the global gene expression profiles of C. jejuni NCTC 11168 cultured in iron-restricted medium were analyzed in response to NE or Epi. Totally, 183 and 156 genes were differentially expressed by NE and Epi respectively, with 102 differentially expressed genes common between the two treatments. These genes are involved in diverse cellular functions including iron uptake systems, motility, virulence, oxidative stress response, nitrosative stress tolerance, enzyme metabolism, DNA repair and metabolism and ribosomal protein biosynthesis. Adherence to and invasion of Caco-2 cells by C. jejuni were enhanced upon exposure to NE or Epi. These results indicated that NE and Epi have similar effects on the gene expression of C. jejuni and that the effects on gene expression may contribute to elucidate the mechanisms on interaction between host and C. jejuni.

2015-02-10 | GSE65187 | GEO

Differential RNA-sequencing of Campylobacter jejuni fur perR mutant

Project description:We report the use of differential RNA-sequencing for the determination of the primary transcriptome of the fur perR mutant of Campylobacter jejuni NCTC 11168. This allows for the genome-wide determination of transcription start sites. Campylobacter jejuni NCTC 11168 fur perR mutant was grown to late log phase, RNA was purified and used for differential RNA-sequencing by 454 sequencing with barcoded libraries, and used for determination of genome-wide transcription start sites

2014-07-01 | E-GEOD-49660 | biostudies-arrayexpress

Differential RNA-sequencing of Campylobacter jejuni fur perR mutant

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Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819

Project description:Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819 Variation

| PRJNA215043 | ENA

Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819

Project description:Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819 Genome sequencing

| PRJNA85567 | ENA