Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Cenchrus violaceus cultivar:PI564586

ABSTRACT: Transcriptomic changes in Pennisetum violaceum in response to salt and drought stress

PROVIDER: PRJNA282366 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR2018226_1.fastq.gz	Fastqsanger.gz
	SRR2018226_2.fastq.gz	Fastqsanger.gz
	SRR2029370_1.fastq.gz	Fastqsanger.gz
	SRR2029370_2.fastq.gz	Fastqsanger.gz
	SRR2029380_1.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 36

Similar Datasets

Proteomic analysis of Pennisetum glaucum under drought stress

Project description:Pearl millet [Pennisetum glaucum (L.) R.Br] is the fifth most important cereal crop next to rice, wheat, maize, and sorghum. It is cultivated especially by small holder farmers in arid and semi-arid regions because of its drought resistance. However, the molecular mechanisms during drought stress in Pennisetum remain elusive. In the present study we have used a shotgun proteomics approach (GEL-LC-Orbitrap-MS) for identification and quantification of proteins from different tissues (root, seed and leaf) under drought and control conditions. Plants were grown in a tube system to survey root growth under drought stress. The water content was measured in the upper and the lower part of the tube using soil moisture sensors. Under drought stress root elongation was observed. Measurement of stomatal conductance showed a clear response to drought stress. For proteomics measurements root, leaf and seed tissues were harvested. In total 2281 proteins were identified, 1095 in root, 1299 in seed, and 1208 in leaf in both stress and control conditions.

2023-08-23 | PXD002923 | Pride

Chrysopogon zizanioides cultivar:PI538757

Project description:Transcriptomic changes in Chrysopogon zizanioides in response to salt and drought stress

| PRJNA282368 | ENA

Avicennia marina

Project description:Transcriptomic changes in Avicennia marina in response to salt and drought stress

| PRJNA283781 | ENA

drought and salt stress response-Eskimo gene characterisation.

Project description:ra06-02_staygreen - drought and salt stress response - Modification of the transcriptome by the eskimo mutation and response to stress. - Individual plants were grown in Fertiss clods in a culture chamber. 3 treatments were made to the plants : control, drought and salt. Keywords: gene knock out,treated vs untreated comparison

2008-09-11 | GSE10384 | GEO

Cenchrus caudatus

Project description:Pennisetum Genome sequencing

| PRJNA632455 | ENA

Cenchrus purpureus

Project description:Pennisetum purpureum Transcriptome

| PRJNA330748 | ENA

drought and salt stress response-Eskimo gene characterisation.

2008-09-10 | E-GEOD-10384 | biostudies-arrayexpress

Differentially expressed genes between WT and AtC3H3 OX, and WT and AtC3H26 OX

Project description:Salinity is a pressing issue causing widespread crop loss, prompting plants to adapt through changes in gene expression. This study investigated the role of the non-tandem CCCH zinc finger protein gene AtC3H3 in Arabidopsis in response to salt stress. AtC3H3, a gene from the non-TZF gene family and known for its RNA-binding and ribonuclease activity, was found to be upregulated under osmotic stresses such as high salt and drought. When overexpressed in Arabidopsis, AtC3H3 led to increased tolerance to salt stress, not drought stress. qRT-PCR analysis showed that the expression of both well-known ABA-dependent salt stress-responsive genes, such as RAB18, RD29B, and RD22, and representative ABA-independent salt stress-responsive genes, such as DREB2A and DREB2B, was significantly higher in AtC3H3 OXs than WT under NaCl treatment, indicating its involvement in both ABA-dependent and ABA-independent signaling pathways. mRNA-Seq analysis using NaCl-treated WT and AtC3H3 OXs revealed no potential target mRNAs of the RNase function of AtC3H3, suggesting that the potential targets of AtC3H3 might be non-coding RNAs, not mRNAs. The study conclusively demonstrates that AtC3H3 plays a crucial role in salt stress tolerance by influencing the expression of salt stress-responsive genes. These findings have opened a new avenue for understanding plant stress mechanisms and suggest potential strategies for enhancing crop resilience to salinity.

2024-10-30 | GSE275862 | GEO

Project description:salt drought stress

| PRJNA1015540 | ENA

Cenchrus flaccidus

Project description:Pennisetum flaccidum Genome sequencing and assembly

| PRJNA689090 | ENA