Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Teleogryllus oceanicus

ABSTRACT: Teleogryllus oceanicus wing bud transcriptome

PROVIDER: PRJNA283744 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR2034750_1.fastq.gz	Fastqsanger.gz
	SRR2034750_2.fastq.gz	Fastqsanger.gz
	SRR2034760_1.fastq.gz	Fastqsanger.gz
	SRR2034760_2.fastq.gz	Fastqsanger.gz
	SRR2034751_1.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 24

Similar Datasets

Teleogryllus oceanicus (field cricket) wing bud proteomics: iTRAQ data

Project description:In Hawaii, a rapidly-evolving mutation in the field cricket Teleogryllus oceanicus silences males by interfering with the development of sound-producing structures on their forewings. The mutation is called flatwing (fw), and it persists because of natural selection imposed by an acoustically-orienting parasitoid. We examined gene expression differences between wild-type and mutant crickets, focusing on juvenile wing buds. We profiled mRNA expression levels using RNA-seq, and characterized the wing bud proteome using quantitative mass spectrometry.

2016-03-31 | PXD002451 | Pride

Teleogryllus oceanicus (field cricket) wing bud proteomics

2016-04-06 | PXD002417 | Pride

Teleogryllus oceanicus

Project description:Teleogryllus oceanicus overview

| PRJNA305070 | ENA

Teleogryllus oceanicus

Project description:Teleogryllus oceanicus Raw sequence reads

| PRJNA384097 | ENA

Teleogryllus oceanicus

Project description:Teleogryllus oceanicus Raw sequence reads

| PRJNA464275 | ENA

Teleogryllus oceanicus

Project description:Teleogryllus oceanicus: Competing adaptations in a wild cricket population

| PRJNA1019311 | ENA

Teleogryllus oceanicus embryo RNA samples

Project description:RNA-seq data from Teleogryllus oceanicus embryos of silent and singing morphs

| PRJEB27235 | ENA

Tissue-specific transcriptomics in the field cricket Teleogryllus oceanicus.

Project description:Field crickets (family Gryllidae) frequently are used in studies of behavioral genetics, sexual selection, and sexual conflict, but there have been no studies of transcriptomic differences among different tissue types. We evaluated transcriptome variation among testis, accessory gland, and the remaining whole-body preparations from males of the field cricket, Teleogryllus oceanicus. Non-normalized cDNA libraries from each tissue were sequenced on the Roche 454 platform, and a master assembly was constructed using testis, accessory gland, and whole-body preparations. A total of 940,200 reads were assembled into 41,962 contigs, to which 36,856 singletons (reads not assembled into a contig) were added to provide a total of 78,818 sequences used in annotation analysis. A total of 59,072 sequences (75%) were unique to one of the three tissues. Testis tissue had the greatest proportion of tissue-specific sequences (62.6%), followed by general body (56.43%) and accessory gland tissue (44.16%). We tested the hypothesis that tissues expressing gene products expected to evolve rapidly as a result of sexual selection--testis and accessory gland--would yield a smaller proportion of BLASTx matches to homologous genes in the model organism Drosophila melanogaster compared with whole-body tissue. Uniquely expressed sequences in both testis and accessory gland showed a significantly lower rate of matching to annotated D. melanogaster genes compared with those from general body tissue. These results correspond with empirical evidence that genes expressed in testis and accessory gland tissue are rapidly evolving targets of selection.

| S-EPMC3564983 | biostudies-literature

Teleogryllus commodus

Project description:Teleogryllus commodus Transcriptome or Gene expression

| PRJNA252786 | ENA

Oceanites oceanicus

Project description:Oceanites oceanicus overview

| PRJNA983027 | ENA