Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Homo sapiens

ABSTRACT: RNA-seq of Human lung cell line A549 infected with Adenovirus

PROVIDER: PRJNA296866 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR2672130.fastq.gz	Fastqsanger.gz
	SRR2672130_1.fastq.gz	Fastqsanger.gz
	SRR2672130_2.fastq.gz	Fastqsanger.gz
	SRR2672230.fastq.gz	Fastqsanger.gz
	SRR2672230_1.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 36

Similar Datasets

Homo sapiens

Project description:A549 Lung Epithelial Cell line Transcriptome

| PRJNA1061515 | ENA

RNA Sequencing Reveals Immunosuppressive Role of Anthrax Lethal Toxin in Human Lung Epithelial and Monocytic Cells

Project description:Using RNA-seq, we report here that anthrax lethal toxin (LeTx) induces immunosuppression in human lung epithelial cell line A549 and monocytic cell line U937.

2017-01-26 | GSE77219 | GEO

scRNA-seq of human fetal lung explants with R-SPONDIN Inhibition and human fetal lung primary tissue

Project description:Here, we used single cell RNA-sequencing (scRNA-seq) to profile 13-week post-conception distal human fetal lung explants cultured in an air liquid interface system and treated with an LGR5 ectodomain adenovirus that inhibits R-Spondin function or control adenovirus. A third, non-infected, condition was also sequenced. We also performed scRNA-seq on distal human fetal lung tissue from an 8.4-week post-conception biological specimen. Diverse cell lineages were captured in all data sets, and include epithelium, mesenchyme, immune, neurons, and endothelium.

2022-01-01 | E-MTAB-10662 | biostudies-arrayexpress

Homo sapiens

Project description:homo lung cancer cell(A549) RNA-seq

| PRJNA824549 | ENA

Expression data from A549 cells infected by adenovirus not carrying virus associated sequences in the genome.

Project description:Non-coding small RNAs are involved in viral life cycles. Adenovirus-encoding small RNAs, virus-associated RNAs (VA RNAs), are transcribed throughout the replication process, and the transcript levels depend on the copy numbers of the viral genome. Although the VA RNA transcription starts immediate early phase, little is known about the function in the early phase. Here we applied replication-deficient adenovirus vectors (AdVs) and novel VA-RNA deleted AdVs to analyze expression change of cellular gene mediated by VA RNAs. Human lung cell, A549, were infected by VA(+) or VA(-) adenoviral vectors. After the designed preiod of infection, cells were harvested and RNA was extacted, followed by DNA microarray analysis.

2014-09-01 | E-GEOD-58605 | biostudies-arrayexpress

Homo sapiens strain:IMR-90

Project description:Gene expression analysis of human primary lung fibroblast cell line IMR-90 infected by adenovirus type 2

| PRJNA236533 | ENA

Mechanism of TP53 and RB1 inactivation-induced neuroendocrine phenotype transformation in TKI-resistant lung adenocarcinoma

Project description:In order to study the mechanism of co-inactivation of RB1 and TP53 in the transformation of lung adenocarcinoma to small cell lung cancer, we established the NCI-H1975 cell line with RB1 knockdown.NCI-H1975 cells were cultured and infected with lentivirus expressing RB1-shRNA (n=3) or pLKO.1-shRNA (n=3), We then performed transcriptome sequencing (RNA-seq) on the above cells.

2023-08-20 | PXD042073 | Pride

Human lung cancer cell line A549 +/- CD43 knockdown

Project description:Human lung cancer cell line A549 +/- CD43 knockdown

| PRJNA749458 | ENA

RNA-seq of human non-small-cell lung cancer cell line A549 treated with Feiyanning

Project description:RNA-seq of human non-small-cell lung cancer cell line A549 treated with Feiyanning

| PRJEB46870 | ENA

RNA sequencing on A549 lung cancer cell line

Project description:RNA sequencing on A549 lung cancer cell line

| PRJNA527653 | ENA