Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Drosophila melanogaster

ABSTRACT: Drosophila melanogaster embryonic development RAMPAGE time series (Biological replicate #2)

PROVIDER: PRJNA351827 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR4733580_1.fastq.gz	Fastqsanger.gz
	SRR4733580_2.fastq.gz	Fastqsanger.gz
	SRR4733590_1.fastq.gz	Fastqsanger.gz
	SRR4733590_2.fastq.gz	Fastqsanger.gz
	SRR4733600_1.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 46

Similar Datasets

Drosophila ananassae

Project description:Drosophila ananassae embryonic development RAMPAGE time series

| PRJNA351809 | ENA

Drosophila simulans

Project description:Drosophila simulans embryonic development RAMPAGE time series

| PRJNA351832 | ENA

Drosophila pseudoobscura

Project description:Drosophila pseudoobscura embryonic development RAMPAGE time series

| PRJNA351829 | ENA

Drosophila erecta

Project description:Drosophila erecta embryonic development RAMPAGE time series

| PRJNA351835 | ENA

Drosophila species embryonic development RAMPAGE time series

Project description:Drosophila species embryonic development RAMPAGE time series

| PRJNA351836 | ENA

Drosophila melanogaster transcriptome life cycle

Project description:Time course analysis series in Development of the transcriptome from Drosophila melanogaster using the Heidelberg FlyArray. All stages were hybridized against embryonic stage 0-4 h as reference control. Keywords: time-course

2003-12-31 | GSE695 | GEO

Histone methylation regulates reproductive diapause in Drosophila melanogaster

Project description:RNA-seq on Drosophila melanogaster ovary (stages 1-7) in: diapause at 12ºC (after 28 days), reproductive at 12ºC (after 28 days), and age-matched control at 25ºC in two inbred genotypes. Each biological replicate is a pool of 25 ovary pairs, and each treatment has three biological replicates.

2022-09-29 | GSE214242 | GEO

Drosophila melanogaster transcriptome life cycle

2010-05-27 | E-GEOD-695 | biostudies-arrayexpress

Drosophila melanogaster

Project description:Drosophila heat stress response time series analysis

| PRJNA96545 | ENA

Prediction of complex phenotypes using the Drosophila melanogaster metabolome

Project description:Understanding the genotype-phenotype map and how variation at different levels of biological organization is associated are central topics in modern biology. Fast developments in sequencing technologies and other molecular omic tools enable researchers to obtain detailed information on variation at DNA level and on intermediate endophenotypes, such as RNA, proteins and metabolites. This can facilitate our understanding of the link between genotypes and molecular and functional organismal phenotypes. Here, we use the Drosophila melanogaster Genetic Reference Panel and nuclear magnetic resonance (NMR) metabolomics to investigate the ability of the metabolome to predict organismal phenotypes. We performed NMR metabolomics on four replicate pools of male flies from each of 170 different isogenic lines. Our results show that metabolite profiles are variable among the investigated lines and that this variation is highly heritable. Second, we identify genes associated with metabolome variation. Third, using the metabolome gave better prediction accuracies than genomic information for four of five quantitative traits analyzed. Our comprehensive characterization of population-scale diversity of metabolomes and its genetic basis illustrates that metabolites have large potential as predictors of organismal phenotypes. This finding is of great importance, e.g., in human medicine, evolutionary biology and animal and plant breeding.

2021-08-05 | MTBLS2060 | MetaboLights

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data