Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Synthetic construct

ABSTRACT: Methyl-Spec-seq data for HOXB13

PROVIDER: PRJNA398472 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR5936715.fastq.gz	Fastqsanger.gz
	SRR5936716.fastq.gz	Fastqsanger.gz

Items per page:

1 - 2 of 2

Similar Datasets

synthetic construct

Project description:Methyl-Spec-seq control data sets

| PRJNA385858 | ENA

Methyl-Spec-seq data for HOXB13

Project description:We developed a novel in-vitro experimental method to characterize the protein-DNA interaction specificity and methylation sensitivity, we called Methyl-Spec-seq. In this data set, mouse HOXB13 (F1-F3) was used as a positive control example to show that Methyl-Spec-seq can determine the relative binding energy for variants with different methylation property, i.e., unmethylated, top hemimethylated, bottom hemimethylated, duplex methylated by either chemical synthesis or enzymatic treatment.

2017-08-17 | GSE102703 | GEO

synthetic construct

Project description:Quantitative profiling of BATF family proteins/JUNB/IRF hetero-trimers using Spec-seq

| PRJNA397060 | ENA

Mus musculus

Project description:Methyl-Spec-seq control data sets

| PRJNA385481 | ENA

Mus musculus

Project description:Methyl-Spec-seq control data sets

| PRJNA385913 | ENA

Methyl-Spec-seq control data sets

Project description:We developed a novel in-vitro experimental method to characterize the protein-DNA interaction specificity and methylation sensitivity, we called Methyl-Spec-seq. In this data set, mouse ZFP57 (F1-F3) was used as a positive control example to show that Methyl-Spec-seq can determine the relative binding energy for variants with different methylation property, i.e., unmethylated, top hemimethylated, bottom hemimethylated, duplex methylated by either chemical synthesis or enzymatic treatment.

2017-08-31 | GSE98686 | GEO

Methyl-Spec-seq control data sets

Project description:We developed a novel in-vitro experimental method to characterize the protein-DNA interaction specificity and methylation sensitivity, we called Methyl-Spec-seq. In this data set, mouse AP1 was used as a positive control example to show that Methyl-Spec-seq can determine the relative binding energy for variants with different methylation property, i.e., unmethylated, top hemimethylated, bottom hemimethylated, duplex methylated by either chemical synthesis or enzymatic treatment.

2017-10-11 | GSE98669 | GEO

Methyl-Spec-seq control data sets

Project description:We developed a novel in-vitro experimental method to characterize the protein-DNA interaction specificity and methylation sensitivity, we called Methyl-Spec-seq. In this data set, mouse ZFP57 (F1-F3) was used as a positive control example to show that Methyl-Spec-seq can determine the relative binding energy for variants with different methylation property, i.e., unmethylated, top hemimethylated, bottom hemimethylated, duplex methylated by either chemical synthesis or enzymatic treatment.

2017-05-10 | GSE98542 | GEO

Spec-seq sequencing data for CTCF [2021 series]

Project description:This series is an updated dataset consisting of the Spec-seq and Methyl-Spec-seq samples for human CTCF with a bigger sequencing libraries and different epigenetic modifications. Each sample has replicate to gurantee the reproducibility for each measurement.

2021-11-06 | GSE188164 | GEO

synthetic construct

Project description:Simulated foodborne outbreak data

| PRJNA305618 | ENA