Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Differentially expressed LncRNAs and mRNA identified by SEQ analysis in colorectal cancer patients

ABSTRACT: Differentially expressed LncRNAs and mRNA identified by SEQ analysis in colorectal cancer patients

PROVIDER: PRJNA413956 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR6159233_1.fastq.gz	Fastqsanger.gz
	SRR6159233_2.fastq.gz	Fastqsanger.gz
	SRR6159234_1.fastq.gz	Fastqsanger.gz
	SRR6159234_2.fastq.gz	Fastqsanger.gz
	SRR6191650_1.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 40

Similar Datasets

Identified differentially expressed lncRNAs in Type 1 Diabetes Patients

Project description:Identified differentially expressed lncRNAs in Type 1 Diabetes Patients

| PRJNA534518 | ENA

Identified differentially expressed lncRNAs in type 2 diabetes patients

Project description:Identified differentially expressed lncRNAs in type 2 diabetes patients

| PRJNA555791 | ENA

Differentially expressed LncRNAs and mRNA identified by SEQ analysis in colorectal cancer patients

Project description:LncRNA plays an important role in gene regulation, but its impact on the pathogenesis of colorectal cancer and the biological function of cancer cells is unclear. In this study, we will use the next generation sequencing technique to study the differences of the expression profiles of lncRNA and mRNA in colorectal cancer tissues, analyzing the differentially expressed genes by GO/KEGG enrichment, and predicting the new lncRNAs’ function. Our results revealed that Comparing with the nontumor colorectal tissues, 1019 lncRNAs (512 upregulated, 507 downregulated) and 3221 mRNAs (1606 upregulated, 1615 downregulated) were differentially expressed in tumor colorectal tissues (fold change>2 and P<0.05).

2017-10-12 | GSE104836 | GEO

Differentially expressed SE-lncRNAs and mRNA in colorectal cancer

Project description:Differentially expressed SE-lncRNAs and mRNA in colorectal cancer

| PRJNA634378 | ENA

Differentially expressed SE-lncRNAs in lung adenocarcinoma

Project description:Differentially expressed SE-lncRNAs in lung adenocarcinoma

| PRJNA805532 | ENA

Differentially expressed miRNAs in colorectal cancer

Project description:Differentially expressed miRNAs in colorectal cancer

| PRJNA658901 | ENA

Differentially expressed SE-lncRNAs and mRNA in colorectal cancer

Project description:To address the role of SE-lncRNAs in CRC tumorigenesis, we performed Arraystar human SE-lncRNA microarray to profile the differentially expressed SE-lncRNAs and mRNA in four CRC and paired peritumoral tissues. According to the filter criteria of Fold Change ≥ 1.5 and P-value < 0.05, a total of 55 significantly upregulated and 29 significantly downregulated SE-LncRNs were identified. These data confirmed that the expression of SE-lncRNA undergoes a change that cannot be ignored during CRC tumorigenesis. We also identified 165 (91 up- and 74 downregulated) differentially expressed mRNA between the two groups（Fold Change > 1.5 and P-value < 0.05）(Fig.1C), which provides help for us to findpotential target genes and further explore the biological function of SE-lncRNA in CRC

2020-05-22 | GSE151021 | GEO

Identified differentially expressed lncRNAs in type 2 diabetes patients

Project description:Long noncoding RNAs (lncRNAs) is already evidently involved in a variety of biological functions and pathophysiological mechanisms underlying the diabetes. However, the role of lncRNAs in the type 2 diabetes (T2D) has not been explored clearly yet. The aim of this study was to determine the circulating lncRNA profile and confirmed the differentially expressed lncRNA between T2D patients.

2020-06-30 | GSE134594 | GEO

Identified differentially expressed lncRNAs in Type 1 Diabetes Patients

Project description:Long noncoding RNAs (lncRNAs) is already evidently involved in a variety of biological functions and pathophysiological mechanisms underlying the diabetes. However, the role of lncRNAs in the type 1 diabetes (T1D) has not been explored clearly yet. The aim of this study was to determine the circulating lncRNA profile and confirmed the differentially expressed lncRNA between T1D patients and healthy control.

2019-12-31 | GSE130279 | GEO

Identification of differentially expressed lncRNAs and mRNAs in OLF

Project description:Identification of differentially expressed lncRNAs and mRNAs in OLF

| PRJNA415999 | ENA