Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

ABSTRACT: Global RNA-seq analysis of Belamcanda chinensis

PROVIDER: PRJNA430284 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR6478780_1.fastq.gz	Fastqsanger.gz
	SRR6478780_2.fastq.gz	Fastqsanger.gz
	SRR6478790_1.fastq.gz	Fastqsanger.gz
	SRR6478790_2.fastq.gz	Fastqsanger.gz
	SRR6478781_1.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 36

Similar Datasets

Project description:Comprehensive analysis of transcriptome of Belamcanda chinensis (L.) DC.

| PRJNA411757 | ENA

Project description:Eukaryotic non-reference transcriptome sequencing of Belamcanda chinensis

| PRJNA1137238 | ENA

Sex-specific small RNA profiling and target gene expression in dioecious and monoecious Pistacia chinensis

Project description:Pistacia chinensis Bunge is known as dioecious, but we have found wild monoecious individuals. In order to screen the candidate genes which may influence the sex expression or floral phenotypic differences of P. chinensis, the inflorescence buds for different sex types associated with the sex differentiation were selected and tested for small RNA sequencing. Sex-specific differentially expressed small RNA were discovered, combined with real-time PCR data, the regulation patterns of various sex types were first revealed. Our study represents the first detailed analysis of small RNA sequencing, providing more clues for understanding the mechanism of sex determination on P. chinensis.

2020-01-01 | GSE128023 | GEO

Project description:Transcriptome sequencing of Belamcanda chinensis seedlings roots treated with CuCl2.

| PRJNA596865 | ENA

Coupling of microRNA-directed phasiRNA generation with alternative splicing in small RNA-mediated gene silencing

Project description:Purpose:We aimed to characterize genome-widely the miRNA population and phasiRNA-generating genes/loci in litchi (Litchi chinensis). Multiple high throughput sequencing strategies, including sRNA sequencing, parallel analysis of RNA ends (PARE) sequencing, and strand-specific RNA-seq, were applied in combination with thorough bioinformatics analyses using a variety of computational methods.

2018-12-20 | GSE98698 | GEO

RNA-seq of Taxus chinensis cells

Project description:We reported the application of high-throughput sequencing technology (RNA-seq) for the transcriptome of T. chinensis cells and the transcriptional alternatives of that responded to MeJA were comprehensively and quantitatively assessed with high-throughput sequencing technology (RNA-seq). By sequencing > 29 million reads (200 bp in length) of cDNA from each of MeJA-treated T. chinensis cells at 16 h (T16) and the control (T0), we identified 46,581 transcripts and uncovered 13,469 genes differentially expressed in response to MeJA. We provided functional clues for understanding the regulation mechanisms of MeJA-mediated defense responses and taxol biosynthesis.

2012-11-16 | GSE28539 | GEO

Belamcanda chinensis, Iris dichotoma, and Iris japonica

Project description:Chloroplast genomes Raw sequence reads of Belamcanda chinensis, Iris dichotoma, and Iris japonica

| PRJNA798580 | ENA

Homo sapiens

Project description:Revisiting Global Gene Expression Analysis (RNA-Seq)

| PRJNA174954 | ENA

Protosalanx hyalocranius

Project description:RNA-seq of Protosalanx chinensis

| PRJNA687230 | ENA

Project description:Rosa chinensis root RNA-seq

| PRJNA587482 | ENA