Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Expression data from SCEC and corresponding normal samples

ABSTRACT: Expression data from SCEC and corresponding normal samples

PROVIDER: PRJNA436486 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Similar Datasets

aCGH data from SCEC and corresponding normal samples

Project description:aCGH data from SCEC and corresponding normal samples

| PRJNA436496 | ENA

Illumina and Affymetrix SNP-array data for 2 ETV6/RUNX1-positive Acute Lymphoblastic Leukemia samples and corresponding normal samples

Project description:This SuperSeries is composed of the following subset Series: GSE25102: Illumina SNP-array data for 2 ETV6/RUNX1-positive Acute Lymphoblastic Leukemia samples and corresponding normal samples GSE25116: Affymetrix SNP-array data for 2 ETV6/RUNX1-positive Acute Lymphoblastic Leukemia samples and corresponding normal samples Refer to individual Series

2012-07-02 | E-GEOD-25117 | biostudies-arrayexpress

Expression data from benign prostatic hyperplasia samples and normal controls

Project description:Expression data from benign prostatic hyperplasia samples and normal controls

| PRJNA488440 | ENA

RNA-seq of two Kaposi’s sarcoma tissue samples and the corresponding two normal tissue samples

Project description:RNA-seq of two Kaposi’s sarcoma tissue samples and the corresponding two normal tissue samples

| PRJNA830866 | ENA

Profiling of human lung tissues on 11 normal control, 11 patient and 11 corresponding mouse xenograft tumours

Project description:The total protein expression level of 11 paired human normal, human lung cancer samples and correspoding mouse xenograft samples were analyzed by LC-MS/MS. These protein expression data were than compared with corresponding DNA copy number changes and mRNA expression level changes among these samples.

2014-12-04 | PXD000853 | Pride

Expression data from SCEC and corresponding normal samples

Project description:Primary SCEC is a rare malignancy without established treatment strategy. Although previous studies suggested that there were similarities between SCEC and SCLC in clinical manifestation and pathological morphology, genetic studies on this highly malignant tumour remained sparse. This study was designed to investigate the gene expression profile of SCEC, and compare it with the known expression data of SCLC and EC.

2018-03-02 | GSE111044 | GEO

Illumina SNP-array data for 2 ETV6/RUNX1-positive Acute Lymphoblastic Leukemia samples and corresponding normal samples

Project description:Acute lymphoblastic leukemia (ALL), the most common malignant disorder in childhood, is typically associated with numerical chromosomal aberrations, fusion genes or small focal deletions, thought to represent important pathogenetic events in the development of the leukemia. Mutations, such as single nucleotide changes, have also been reported in childhood ALL, but these have only been studied by sequencing a small number of candidate genes. Herein, we report the first unbiased sequencing of the whole exome of two cases of pediatric ALL carrying the ETV6/RUNX1 (TEL/AML1) fusion gene (the most common genetic subtype) and corresponding normal samples. A total of 14 somatic mutations were identified, including four and seven protein-altering nucleotide substitutions in each ALL. Twelve mutations (86%) occurred in genes previously described to be mutated in other types of cancer, but none was found to be recurrent in an extended series of 29 ETV6/RUNX1-positive ALLs. The number of single nucleotide mutations was similar to the number of copy number alterations as detected by single nucleotide polymorphism arrays. Although the true pathogenetic significance of the mutations must await future functional evaluations, this study provides a first estimate of the mutational burden at the genetic level of t(12;21)-positive childhood ALL. Illumina SNP-array genotyping was performed according to the manufacturer's directions on DNA extracted from 2 leukemic bone marrow samples and two corresponding normal blood samples. The genotype data from the arrays were used for quality assesment of genotype data from high throughput sequencing.

2012-07-02 | E-GEOD-25102 | biostudies-arrayexpress

Expression data from normal human cerebellum

Project description:Expression data from normal human cerebellum

| PRJNA704662 | ENA

Whole-transcript expression data of native stromal cells from normal human tonsil samples

Project description:Whole-transcript expression data of native stromal cells from normal human tonsil samples

| PRJNA621176 | ENA

Affymetrix SNP-array data for 2 ETV6/RUNX1-positive Acute Lymphoblastic Leukemia samples and corresponding normal samples

2012-07-03 | GSE25116 | GEO