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Impact of Tle1, Tle3, and Tle4 deficiency on hematopoietic stem cells (HSCs) [RNA-seq]

ABSTRACT: Impact of Tle1, Tle3, and Tle4 deficiency on hematopoietic stem cells (HSCs) [RNA-seq]

PROVIDER: PRJNA521469 | ENA |

REPOSITORIES: ENA

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			Action	DRS
	SRR8550060.fastq.gz	Fastqsanger.gz
	SRR8550060_1.fastq.gz	Fastqsanger.gz
	SRR8550060_2.fastq.gz	Fastqsanger.gz
	SRR8550061_1.fastq.gz	Fastqsanger.gz
	SRR8550061_2.fastq.gz	Fastqsanger.gz

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Impact of Tle1, Tle3, and Tle4 deficiency on hematopoietic stem cells (HSCs) [RNA-seq]

Project description:To compare the transcriptomes between control and Tle1/3/4-deficient HSCs Tle co-repressors can co-opt a number of transcription factors to repress target gene expression. Due to gene duplication during evolution, there are 4 Tle genes in mammalian genome, and their functional redundancy has a major hurdle to understand their roles in hematopoietic stem cells (HSCs). Here we used Vav-Cre to ablate Tle1, 3, and 4 genes in HSCs, and performed RNA-seq to determine the impact of Tle deficiency on HSCs. To further define the regulatory mechanisms, we performed Tle3 ChIPseq on c-Kit+ hematopoietic progenitor cells. The data obtained collectively indicate a critical, intrinsic requirement for Tle corepressors in HSC self-renewal.

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