Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

ABSTRACT: Oat (Avena sativa L.) transcriptome

PROVIDER: PRJNA523140 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR8589820_1.fastq.gz	Fastqsanger.gz
	SRR8589820_2.fastq.gz	Fastqsanger.gz
	SRR8589821_1.fastq.gz	Fastqsanger.gz
	SRR8589821_2.fastq.gz	Fastqsanger.gz
	SRR8589822_1.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 22

Similar Datasets

Avena sativa

Project description:Oat (Avena sativa) Raw sequence reads

| PRJNA355647 | ENA

Oat (Avena sativa) WGS and RNA-seq

Project description:Oat (Avena sativa) WGS and RNA-seq

| PRJEB46365 | ENA

Project description:Chromosome-scale assembly of oat (Avena sativa) cultivar Sang

| PRJEB44810 | ENA

Assessing the impact of nitrogen supplementation in oats across multiple growth locations and years with targeted phenotyping and high-resolution metabolite profiling approaches

Project description:Oats (Avena sativa L.) are a healthy food, being high in dietary fibre (e.g. β-glucans), antioxidants, minerals, and vitamins. Understanding the effect of variety and crop management on nutritional quality is important. The response of four oat varieties to increased nitrogen levels was investigated across multiple locations and years with respect to yield, grain quality and metabolites (assessed via GC- and LC- MS). A novel high-resolution UHPLC-PDA-MS/MS method was developed, providing improved metabolite enrichment, resolution, and identification. The combined phenotyping approach revealed that, amino acid levels were increased by nitrogen supplementation, as were total protein and nitrogen containing lipid levels, whereas health-beneficial avenanthramides were decreased. Although nitrogen addition significantly increased grain yield and β-glucan content, supporting increasing the total nitrogen levels recommended within agricultural guidelines, oat varietal choice as well as negative impacts upon health beneficial secondary metabolites and the environmental burdens associated with nitrogen fertilisation, require further consideration.

2021-04-26 | MTBLS1801 | MetaboLights

Impact of barley yellow dwarf virus on the composition of metabolites in

Project description:Greenhouse experiment testing the effects of Barley yellow dwarf virus on Avena sativa and the fate of isotopically labeled MAOM added to soil

2024-04-17 | MSV000094560 | MassIVE

Project description:Charting oat (Avena Sativa) embryo and endosperm transcription factor expression pattern

| PRJNA433275 | ENA

Project description:Avena sativa L Transcriptome Sequencing

| PRJNA393896 | ENA

Equally mixed of eight RNA samples from various tissues at different growth stages for hexaploid oats

Project description:Avena sativa ssp. nuda, Avena sativa Raw sequence reads

| PRJNA794002 | ENA

Avena sativa strain:Multiple populations | isolate:Multiple populations | breed:Multiple populations | cultivar:Multiple populations

Project description:Genome analysis in Avena sativa reveals hidden breeding barriers and opportunities for oat improvement

| PRJNA760785 | ENA

Project description:Avena sativa (oats)