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Marchantia polymorpha

ABSTRACT: common liverwort

PROVIDER: PRJNA53583 | ENA |

REPOSITORIES: ENA

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Dataset's files

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			Action	DRS
		Other
	DRR000966_1.fastq.gz	Fastqsanger.gz
	DRR000966_2.fastq.gz	Fastqsanger.gz
	DRR042261.fastq.gz	Fastqsanger.gz
	DRR042262.fastq.gz	Fastqsanger.gz

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Similar Datasets

DE-ETIOLATED1 has a role in the circadian clock of the liverwort Marchantia polymorpha

Project description:Identification of genes with circadian rhythm in the liverwort Marchantia polymorpha subsp. ruderalis

2021-07-21 | GSE180340 | GEO

Conservation of antiviral defences in the non-vascular plant Marchantia polymorpha

Project description:Most of our current knowledge about the molecular events ruling plant-virus interaction come from studies focusing on vascular plants. We here characterized the molecular, cellular and physiological events goberning plant-virus interactions in the non-vascular liverwort Marchantia polymorpha.

2024-08-16 | GSE241827 | GEO

Marchantia polymorpha

Project description:Transcriptome analysis of antheridia of the liverwort, Marchantia polymorpha.

| PRJDB4420 | ENA

Marchantia polymorpha

Project description:Salinity stress-responsive transcription factors in the liverwort Marchantia polymorpha

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5-methyl cytosine profile of the wild type and Mpmet mutant in Marchantia polymorpha

Project description:To understand a role of MpMET in maintenance of cytpsine methylation and transposon silencing, we obtained a genome wide profile of 5-methylated cytosine from the Mpmet mutant of a model liverwort, Marchantia polymorpha.

2023-09-21 | GSE234851 | GEO

Functional conservation of jasmonate-related MYC transcription factors in Marchantia polymorpha

Project description:The lipid-derived phytohormone jasmonoyl-isoleucine (JA-Ile) regulates plant immunity, growth and development in vascular plants by activating genome-wide transcriptional reprogramming. In Arabidopsis, this is largely orchestrated by the master regulator MYC2 and related transcription factors (TFs). However, the TFs activating this pathway in basal plant lineages are currently unknown. We report the functional conservation of MYC-related TFs between the eudicot Arabidopsis thaliana and the liverwort Marchantia polymorpha, a plant belonging to one of the most basal land-plants lineages. Phylogenetic analysis suggests that MYC function first appeared in charophycean algae, and therefore predates the evolutionary appearance of any other jasmonate pathway component. Marchantia possesses two functionally interchangeable MYC genes, one in females and one in males. Similar to AtMYC2, MpMYCs showed nuclear localization, interaction with JAZ-repressors, and regulation by light. Phenotypic and molecular characterization of loss- or gain-of-function mutants demonstrated that MpMYCs are necessary and sufficient for the activation of the pathway in Marchantia, but unlike their Arabidopsis orthologs, do not regulate fertility. Our results show that despite 450 million years of independent evolution, MYCs are functionally conserved between bryophytes and eudicots. Genetic conservation in one of the most basal lineages suggests that MYC function existed in the common ancestor of land plants and evolved from a pre-existing MYC function in charophycean algae.

2019-03-19 | GSE124159 | GEO

Marchantia polymorpha subsp. ruderalis

Project description:Transcriptiome after auxin treatment in the liverwort Marchantia polymorpha

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Marchantia polymorpha subsp. ruderalis

Project description:Genomic and transcriptomic analyses of the liverwort Marchantia polymorpha

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Marchantia polymorpha strain:Takaragaike

Project description:RNA sequencing of liverwort Marchantia polymorpha wild type and gun1 mutant spores

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Proteomic response of the early divergent liverwort Marchantia polymorpha during infection with the oomycete pathogen Phytophthora palmivora

Project description:Here, we define the proteomic response of the early divergent liverwort Marchantia polymorpha during infection with the oomycete pathogen Phytophthora palmivora. We sampled whole liverwort thalli that were mock-inoculated (water) or infected with P. palmivora zoospores at 4 and 8 days post inoculation (dpi). This analysis revealed the protein profiles of liverworts during the biotrophic (4 dpi) and necrotrophic (8 dpi) stages of pathogen infection. In combination with additional omics datasets, our analyses reveal conserved aspects in the molecular response to pathogen infection in liverworts and angiosperms.

2019-06-24 | PXD012076 | Pride

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