Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

ABSTRACT: Whole genome sequencing of Streptococcus equi subspecies zooepidemicus

PROVIDER: PRJNA565853 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR10132540_1.fastq.gz	Fastqsanger.gz
	SRR10132540_2.fastq.gz	Fastqsanger.gz
	SRR10132541_1.fastq.gz	Fastqsanger.gz
	SRR10132541_2.fastq.gz	Fastqsanger.gz

Items per page:

1 - 4 of 4

Similar Datasets

Project description:RNA-seq of Streptococcus equi subspecies zooepidemicus

| PRJNA566268 | ENA

Investigation of the transcriptional changes associated with phenotype switching in Streptococcus equi subspecies equi strain 1691.

Project description:Streptococcus equi subspecies equi, strain 1691 grown on COBA streptococcal selective agar shows classical mucoid colony morphology in addition to a reduced capsule phenotype. This project aimed to identify changes in the transcriptional profile between the two morphologies.

2016-12-15 | E-MTAB-4147 | biostudies-arrayexpress

Transcriptomic Analysis of Equine Placenta Reveals Key Regulators and Pathways Involved in Ascending Placentitis

Project description:Placentitis was induced in six mares at approximately 290d of gestation (placentitis group), and six mares with gestationally age-matched (290 d) pregnancies did not receive any treatment (control group). For induction of placentitis in the former group, Streptococcus equi subsp. zooepidemicus was introduced intracervically.

2020-11-27 | GSE147161 | GEO

Comprehensive proteomics for Discovery vaccine candidates against Streptococcus equi Infections

Project description:Streptococcus equi subspecies equi (S. equi) is a major pathogen which cause strangles, a highly contagious respiratory infection, in horses and other equines. In this study, we purified the extracellular vesicles (EVs) of S. equi ATCC 39506 and evaluated them as vaccine candidates against S. equi infections in mice. Through immunization in an animal model and immunoprecipitation-mass spectrometry, we evaluated EV as vaccine candidates against S. equi infections and identified novel immunogenic proteins.

2021-08-06 | PXD025527 | Pride

Comprehensive proteomics for Discovery vaccine candidates against Streptococcus equi Infections

Project description:Streptococcus equi subspecies equi (S. equi) is a major pathogen which cause strangles, a highly contagious respiratory infection, in horses and other equines.In this study, we discovered potential vaccine candidates using comprehensive proteomics and reverse vaccinology. As the initial step, we divided proteome of S. equi ATCC 39506 into whole cell lysate, secretory proteome, membrane proteome and extracellular vesicle and then, comparative proteomic analysis was performed to characterize the functional features of the proteome. Especially, extracellular vesicle of S. equi was evaluated at the first time. Total 114 potential vaccine candidates (PVCs) were selected using reverse vaccinology and knowledge based annotations. Comprehensive proteomic analysis confirmed that 60 PVCs were identified in S. equi ATCC 39506. Particularly, 32 PVCs were enriched in the EV proteome, suggesting that this cellular fraction may serve as vaccine.

2021-08-06 | PXD025152 | Pride

Project description:Whole genome sequencing of S. equi subspecies zooepidemicus clinical sample

| PRJEB24181 | ENA

Equine Cervical Remodelling during Prepartum Period and Placentitis: A Transcriptomic Approach (Stroma)

Project description:Placentitis was induced in five mares at approximately 290d of gestation (placentitis group), four mares with gestationally age-matched (290 d) pregnancies did not receive any treatment (control group), and the remaining three mares were maintained until approximately 330 d of gestation (prepartum group). For induction of placentitis in the former group, Streptococcus equi subsp. zooepidemicus was introduced intracervically.

2021-05-08 | GSE162466 | GEO

Equine Cervical Remodelling during Prepartum Period and Placentitis: A Transcriptomic Approach (Mucosa)

2021-05-08 | GSE162465 | GEO

Transcriptomic analysis reveals the key regulators and molecular mechanisms underlying myometrial activation during equine placentitis

2020-04-09 | GSE139986 | GEO

Streptococcus equi subsp. zooepidemicus

Project description:Streptococcus equi subsp. zooepidemicus

| PRJNA967835 | ENA