Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Arabiodpsis bsu-q and flg22-responsive genes

ABSTRACT: Arabiodpsis bsu-q and flg22-responsive genes

PROVIDER: PRJNA588072 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR10408785.fastq.gz	Fastqsanger.gz
	SRR10408786.fastq.gz	Fastqsanger.gz
	SRR10408787.fastq.gz	Fastqsanger.gz
	SRR10408788.fastq.gz	Fastqsanger.gz
	SRR10408789.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 11

Similar Datasets

Arabiodpsis bsu-q and flg22-responsive genes

Project description:Comparison of differential gene expression in WT (Col-0) and bsu-q, and flg22-responsive genes in Col-0 and bsu-q.

2019-11-11 | GSE140037 | GEO

Identification of early flg22 responsive genes in Arabidopsis seedlings

Project description:The goal of this experiment was to identify the early responsive genes activated by the 22 amino acid peptide of bacterial flagellin (flg22) in Arabidopsis seedlings that are involved in the initial responses important for plant innate immunity. We used the microarrays to detail the global program of gene expression underlying intial cellular and molecular responses to microbial associated molecualr patterns (MAMPs). Arabidopsis seedlings were treated with 2 nM flg22 for 30 min and 60 min. Transcript profiles were analyzed and compared between control and treated cells to identify early flg22 responsive genes.

2010-03-18 | E-GEOD-17382 | biostudies-arrayexpress

Identification of early flg22 responsive genes in Arabidopsis mesophyll cells

Project description:The goal of this experiment was to identify the early responsive genes activated by the 22 amino acid peptide of bacterial flagellin (flg22) in Arabidopsis mesophyll cells that are involved in the initial responses important for plant innate immunity. We used the microarrays to detail the global program of gene expression underlying intial cellular and molecular responses to microbial associated molecualr patterns (MAMPs). Arabidopsis mesophyll protoplasts were treated with 100 nM flg22 for 30 min and 60 min. Transcript profiles were analyzed and compared between control and treated cells to identify early flg22 responsive genes.

2010-03-18 | E-GEOD-16472 | biostudies-arrayexpress

Identification of early flg22 responsive genes in Arabidopsis seedlings

2010-03-18 | GSE17382 | GEO

Identification of early flg22 responsive genes in Arabidopsis mesophyll cells

2010-03-18 | GSE16472 | GEO

Identification of flg22-responsive BSU1 phosphorylation sites

Project description:To investigate flg22-induced posttranslational modification of BSU1 family proteins, we performed metabolic Stable Isotope Labeling In Arabidopsis followed by Immuno-Precipitation and Mass Spectrometry (SILIA IP-MS) analysis, with the isotopes switched in replicate experiments.

2023-03-10 | PXD016283 | Pride

mpk6 flg22 - Flagellin response in mpk mutants

Project description:au-09-01_mpk_flagellin_edu - mpk6 flg22 - Investigate flagellin mpk dependent genes - 2 weeks mpk6 flg22 treated 1h with 1 microM flg22. Keywords: treated vs untreated comparison

2012-01-01 | GSE23193 | GEO

Targeted quantification of flg22-responsive BSU1 phosphorylation sites

Project description:To confirm the flg22-induced BSU1 phosphorylation site, we performed targeted quantification by PRM analysis with SILIA IP-MS sample. The isotopes switched in replicate experiments.

2023-03-10 | PXD016257 | Pride

mpk3 flg22 - Flagellin response in mpk mutants

Project description:au-09-01_mpk_flagellin_edu - mpk3 flg22 - Investigate flagellin mpk dependent genes - 2 weeks mpk3 plants treated 1 h with 1 microM flg22. Keywords: treated vs untreated comparison

2012-01-01 | GSE23188 | GEO

mpk4 flg22 - Flagellin response in mpk mutants

Project description:au-09-01_mpk_flagellin_edu - mpk4 flg22 - Investigate flagellin mpk dependent genes - 2 weeks mpk4 plants treated or untreated with 1h with 1 microM flg22 Keywords: treated vs untreated comparison

2012-01-01 | GSE23189 | GEO

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data