Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Transcriptome of the panx1a-knock out zebrafish

ABSTRACT: Transcriptome of the panx1a-knock out zebrafish

PROVIDER: PRJNA612878 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR11315237_1.fastq.gz	Fastqsanger.gz
	SRR11315237_2.fastq.gz	Fastqsanger.gz
	SRR11315238_1.fastq.gz	Fastqsanger.gz
	SRR11315238_2.fastq.gz	Fastqsanger.gz
	SRR11315239_1.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 12

Similar Datasets

Transcriptome of single and double pannexin1-knock out zebrafish lines

Project description:Transcriptome of single and double pannexin1-knock out zebrafish lines

| PRJNA753704 | ENA

Transcriptome of the panx1a-knock out zebrafish

Project description:Pannexin 1 (Panx1) forms ATP-permeable membrane channels that play roles in the nervous system. The analysis of roles in both standard and pathological conditions benefits from a model organism with rapid development and early onset of behaviors. Such a model was developed by ablating the zebrafish panx1a gene using TALEN technology. Here, RNA-seq data of 6dpf wild type and knock-out zebrafish is reported which have been generated by gene editing of exon 4 of the panx1a gene.

2020-06-01 | GSE147068 | GEO

Transcriptome of single and double pannexin1-knock out zebrafish lines

2022-03-07 | GSE181853 | GEO

Transcriptome of FERRY component knock-out cell lines

Project description:Goal: elucidate transcriptomic changes upon knock-out of components of the FERRY complex Methods: RNA extraction from HeLa wildtype and fy-1, fy-2, fy-4 and fy-5 knock-out celllines and subsequent RNASeq Results: We observed differences in the transcriptome of all four knock-out cell lines Conclusions: In the Analysis we focused on genes that were differentially expressed in all four KO cell lines or upon KO of fy-1 and fy-2.

2023-04-27 | GSE230114 | GEO

Transcriptome of FERRY component knock-out cell lines

Project description:Transcriptome of FERRY component knock-out cell lines

| PRJNA957688 | ENA

Egg and liver proteome in vtg2 knocked-out zebrafish females

Project description:CRISPR/Cas9 knock-out of the vtg1 and vtg3 genes was performed in zebrafish separately. This project involves proteomics screening for validation of the absence of targeted proteins in vtg1 and vtg3 and their variants in knocked out female zebrafish in eggs and investigating possible changes within the corresponding proteomes as a results of the absence of these specific vitellogenins and their variants.

2023-10-09 | PXD042791 | Pride

Egg proteome in vtg1 and vtg3 knocked-out zebrafish females

2021-09-09 | PXD021302 | Pride

Transcriptome of MEF cells with or without Fbxw7 knock out

Project description:This study describes the transcriptome profiling of MEF cells with or without Fbxw7 knock out

2023-12-30 | GSE164135 | GEO

Striatum transcriptome analysis of Shank3 knock-out/heterozygous mice

Project description:Shank3 is a core excitatory postsynaptic protein expressed in multiple brain regions including the medial prefrontal cortex, striatum, and hippocampus. Shank3 knock-out mice display autism-like behaviors and synaptic dysfunction. To understand molecular mechanisms underlying the behavioral and synaptic changes, we performed transcriptome (RNA-sequencing) analysis of the striatum tissues from 10 to 12-week-old wild-type and Shank3 knock-out/heterozygous mice.

2019-09-11 | GSE124946 | GEO

Striatum transcriptome analysis of Shank3 knock-out/heterozygous mice

Project description:Striatum transcriptome analysis of Shank3 knock-out/heterozygous mice

| PRJNA514401 | ENA