Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

ScRNAseq of embryoid bodies derived from control mESC or mESC pulsed with DUX expression

ABSTRACT: scRNAseq of embryoid bodies derived from control mESC or mESC pulsed with DUX expression

PROVIDER: PRJNA627848 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR11604217_1.fastq.gz	Fastqsanger.gz
	SRR11604217_2.fastq.gz	Fastqsanger.gz
	SRR11604218_1.fastq.gz	Fastqsanger.gz
	SRR11604218_2.fastq.gz	Fastqsanger.gz
	SRR11604219_1.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 12

Similar Datasets

scRNAseq of embryoid bodies derived from control mESC or mESC pulsed with DUX expression

Project description:scRNAseq identifies extra-embryonic cell type preference for DUX-pulsed mESC differentiating into embryoid bodies.

2021-05-21 | GSE149266 | GEO

Expression data from Mst knockout embryoid bodies and wild type embryoid bodies

Project description:Mst1/Mst2 are central components of Hippo pathway. We examined the role of Mst1/Mst2 in ES cell differentiation. In this data set, we include expression data from day 4 and day 8 Mst1/Mst2 knockout ES cell formed embryoid bodies and wild type embryoid body controls.

2014-01-02 | GSE50219 | GEO

Expression data from Mst knockout embryoid bodies and wild type embryoid bodies

2014-01-02 | E-GEOD-50219 | biostudies-arrayexpress

Embryoid Bodies from Mouse R1 ES - 9 day

Project description:Embryoid Bodies from Mouse R1 ES - 9 day Keywords: other

2005-07-28 | GSE3007 | GEO

polyA-RNA-seq from mESC treated with doxorubicin

Project description:control vs doxorubicin treated mESC WT, p53 KO mESC, and Dux KO mESC

2021-05-21 | GSE149232 | GEO

Effect of endoglin loss on embryoid bodies

Project description:Analysis of embryonic sten cell-derived embryoid bodies following endoglin knock out. Loss of endoglin leads to profound reduction of key hematopoietic regulators including SCL, LMO2, Gata2, and TGF-β signaling molecule ALK-1. Results provide insight into molecular mechanisms underlying hemangioblast and primitive hematopoietic development.

2011-05-16 | GSE29300 | GEO

Geminin represses mesendoderm cell fate acquisition in embryoid bodies

Project description:Geminin is a small nucleoprotein that neuralizes ectoderm in the Xenopus embryo. Geminin promotes neural fate acquisition of mouse embryonic stem cells: Geminin knockdown during neural fate acquisition decreased expression of neural precursor cell markers (Pax6, Sox1), while increasing expression of Pitx2, Lefty1 and Cited2, genes involved in formation of the mouse node. Here we differentiated mouse embryonic stem cells into embryoid bodies to study Geminin's ability to repress primitive streak mesendoderm fate acquisition. We used microarrays to define the sets of genes that are regulated by Geminin during cell fate acquisition in embryoid bodies, using Dox-inducible Geminin knockdown or overexpression mouse embryonic stem cell lines.

2014-07-01 | GSE39676 | GEO

Expression profiling of METTL14 depleted human embryoid bodies

Project description:Expression profiling of METTL14 depleted human embryoid bodies

| PRJNA990568 | ENA

CLIP-seq of Csrp1 in mouse embryoid bodies of day 9

Project description:V6.5 mESCs over-expressing V5-tagged Csrp1 and wild-type mESCs were differentiated into embryoid bodies (EBs) and collected at day 9 for CLIP-seq.

2024-08-23 | GSE226213 | GEO

11-Point Time Course Study of Differentiating J1 Embryoid Bodies

Project description:An 11-point time course study on differentiating embryoid bodies from a murine J1 embryonic stem cell line. The time course includes 0 hr, 6 hr, 12 hr, 18 hr, 24 hr, 36 hr, 48 hr, 4 days, 7 days, 9 days and 14 days. Keywords: Time course

2005-12-06 | GSE3749 | GEO

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data