Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

ABSTRACT: Sequencing of bacterial composition in honey bee larvae infected with American foulbrood disease

PROVIDER: PRJNA661982 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR12602737.fastq.gz	Fastqsanger.gz
	SRR12602738.fastq.gz	Fastqsanger.gz
	SRR12602739.fastq.gz	Fastqsanger.gz
	SRR12602740.fastq.gz	Fastqsanger.gz
	SRR12602741.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 16

Similar Datasets

GNPS - Self-Resistance Mechanism mediated by N-acetyltransferase PamZ

Project description:Self-resistance mechanism mediated by N-acetyltransferase PamZ by deactivation of own antibacterial agent paenilamicin in Paenibacillus larvae, the causative agent of the honey bee disease American Foulbrood.

2022-01-18 | MSV000088695 | GNPS

The overall response of Paenibacillus larvae to bodily fluids of honeybee larvae (Apis mellifera).

Project description:Paenibacillus larvae, the causal agent of American Foulbrood disease (AFB), affects honeybee health worldwide. The present study investigates the transcriptional response of this Gram-positive, endospore-forming bacterium to bodily fluids from honeybee larvae. Four different conditions were evaluated with a loop design: sampling of in vitro grown P. larvae cultures one or four hours after addition of larval fluids or BHIT-broth (C1, T1, C4, T4).

2014-12-22 | GSE37481 | GEO

Project description:Alterations of fungal composition in honey bee larvae infected with chalkbrood disease

| PRJNA662004 | ENA

Gene expression profile of experimentally Deformed wing virus (DWV)-infected honey bees: Naive control vs. DWV-infected pupae

Project description:Transcriptional profiling of honey bee pupae challenging a DWV infection by comparing the gene expression profiles of untreated honey bee pupae with DWV-infected pupae. Goal was to determine the gene expression profile of DWV-infected honey bee pupae.

2016-11-15 | E-MTAB-5070 | biostudies-arrayexpress

Single-cell dissection of aggression in honeybee colonies

Project description:RNA-Sequencing performed on 177 honey bee whole-brains, divided into "soldier" and "forager" groups from Puerto Rican honey bee colonies.

2023-05-09 | GSE146085 | GEO

Paenibacillus larvae subsp. larvae BRL-230010

Project description:Causative agent of American foulbrood disease of honey bees

| PRJNA13476 | ENA

Recipe for a busy bee: MicroRNAs in honey bee caste determination (microRNA array)

Project description:Social caste determination in the honey bee is assumed to be determined by the dietary status of the young larvae and translated into physiological and epigenetic changes through nutrient-sensing pathways. We have employed microRNA gene-microarray, and observed that both worker jelly and royal jelly showed dynamic changes in miRNA content during the 4th to 6th day of larval development . Adding specific miRNAs to royal jelly elicited significant changes in queen larval mRNA expression and in morphological characters of the emerging adult queen bee. We propose that miRNAs in the nurse bee secretions constitute an additional element in the regulatory control of caste determination in the honey bee.

2013-12-31 | GSE50457 | GEO

Recipe for a busy bee: MicroRNAs in honey bee caste determination

2014-01-06 | GSE44853 | GEO

Paenibacillus larvae genomic variability

Project description:American Foulbrood disease agent, Paenibacillus larvae, genomic variability in Europe

| PRJEB40862 | ENA

Recipe for a busy bee: MicroRNAs in honey bee caste determination

Project description:Social caste determination in the honey bee is assumed to be determined by the dietary status of the young larvae and translated into physiological and epigenetic changes through nutrient-sensing pathways. We have employed Illumina/Solexa sequencing to examine the small RNA content in the bee larval food source, and show that worker jelly is enriched in miRNA complexity and abundance relative to royal jelly. The miRNA levels in worker jelly were 7-215 fold higher than in royal jelly, and both jellies showed dynamic changes in miRNA content during the 4th to 6th day of larval development. Adding specific miRNAs to royal jelly elicited significant changes in queen larval mRNA expression and in morphological characters of the emerging adult queen bee. We propose that miRNAs in the nurse bee secretions constitute an additional element in the regulatory control of caste determination in the honey bee. We collected worker and royal jelly of the Italian honeybee (ZND No.1, Apis mellifera ligustica) at 73~90 hours (4th-day larvae), 97~114 hours (5th-day larvae), and 121~138 hours (6th-day larvae) after hatching. After total RNA was extractedM-BM- and quantified , relative equal amounts of total RNAs from each of the three sampling days were pooled into respectively worker and royal jelly samples, and the fraction of small RNAs less than 30nt long was retained and sequenced on the Illumina/Solexa high-throughput platform (HTP).

2014-01-06 | E-GEOD-44853 | biostudies-arrayexpress

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data