Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

ABSTRACT: Meta-transcriptomics sequencing of bat-infesting arthropods

PROVIDER: PRJNA674504 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR12983409_1.fastq.gz	Fastqsanger.gz
	SRR12983409_2.fastq.gz	Fastqsanger.gz
	SRR12983410_1.fastq.gz	Fastqsanger.gz
	SRR12983410_2.fastq.gz	Fastqsanger.gz
	SRR12983411_1.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 18

Similar Datasets

Project description:Metagenomic sequencing of bat infesting ectoparasites

| PRJNA1016132 | ENA

Bat Guano

Project description:Bat guano meta genome

| PRJNA875500 | ENA

Project description:meta-transcriptomics sequencing data

| PRJNA680695 | ENA

Project description:Swine meta-transcriptomics sequencing

| PRJNA800593 | ENA

Project description:Meta-transcriptomics sample

| PRJNA1144058 | ENA

Project description:Tempe Meta-transcriptomics

| PRJNA1137816 | ENA

Hendra virus infection of bat (Pteropus alecto) and human cells

Project description:SILAC labeled human kidney cells (293 cells) or bat kidney cells (PakiT03cells)were infected with Hendra virus for 8 or 24 hours and compared to uninfected control cells. Protein identification and quantitation relied on a combination of Uniprot lists of proteins and Proteomics Informed by Transcriptomics (PIT) analysis whereby RNA extracted from the same samples was deep sequenced and the sequencing data was used to construct mRNA from which possible ORFS were inferred and used as a search space by MaxQuant.

2014-11-05 | PXD001165 | Pride

Comparison of human and bat metabolism.

Project description:Compared to other mammals, bats have increased longevity and higher resistance to cancer and infectious disease, in addition to their capacity for flight. This raises questions about bat metabolism. While prior studies have analyzed the metabolic requirements of flight, no study has integrated metabolomics, transcriptomics, and proteomics to characterize bat metabolism. In this work, we characterize fundamental differences in central metabolism between fibroblast cell lines from a black fruit bat (Pteropus alecto) and human, by analyzing multi-omics data via computational modelling of metabolic flux.

2024-06-20 | PXD043121 | JPOST Repository

Arthropoda

Project description:Arthropods sequencing

| PRJDB13460 | ENA

Project description:Wineteractions - Meta-transcriptomics exploration

| PRJNA1047320 | ENA