Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

ChIP-seq from WT vs. Letmd1 KO brown adipose tissue (BAT) for BRG1

ABSTRACT: ChIP-seq from WT vs. Letmd1 KO brown adipose tissue (BAT) for BRG1

PROVIDER: PRJNA685186 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR13253492.fastq.gz	Fastqsanger.gz
	SRR13253493.fastq.gz	Fastqsanger.gz
	SRR13253494.fastq.gz	Fastqsanger.gz
	SRR13253495.fastq.gz	Fastqsanger.gz
	SRR13253496.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 6

Similar Datasets

ChIP-seq from WT vs. Letmd1 KO brown adipose tissue (BAT) for BRG1

Project description:The chromatin remodeler BRG1 is altered in the Letmd1 KO mice. We performed chromatin IP for BRG1 from BAT of wild-type (WT) versus Letmd1 KO mice.

2021-12-14 | GSE163204 | GEO

PKGI WT vs KO BAT

Project description:Brown adipose tissue (BAT) and brown adipocytes differentiated in vitro from preadipocytes of PKGI-/- mice vs. WT were compared on a whole genome DNA array

2008-12-31 | GSE11890 | GEO

RNA-seq of male and female mouse brown adipose tissue (BAT) transcriptome

Project description:The interscapular brown adipose tissue (BAT) depots of adult male and female C57BL/6J mice, housed at 22 °C, were analyzed to identify sex differences in the BAT transcriptome at basal housing conditions.

2021-06-16 | E-MTAB-8717 | biostudies-arrayexpress

Prdm16 Knockout Brown Adipose Tissue

2014-04-09 | GSE55080 | GEO

Prdm16 Knockout Brown Adipose Tissue

Project description:Gene expression profile from brown adipose tissues of Prdm16 knockout and wile type mice. Prdm16 is a transcription factor that regulates the thermogenic gene program in brown and beige adipocytes. However, whether Prdm16 is required for the development or physiological function of brown adipose tissue (BAT) in vivo has been unclear. By analyzing mice that selectively lacked Prdm16 in the brown adipose lineage, we found that Prdm16 was dispensable for embryonic BAT development. Brown adipose tissues were collected from Prdm16 knockout and wiletype mice with 4 biological replicates per condition. Experiment was done in two separate batch for 6-week-old and 11-month-old. Extracted RNA was hybridized to Agilent two-color arrays.

2014-04-09 | E-GEOD-55080 | biostudies-arrayexpress

Taf7l Modulates Brown Adipose Tissue Formation

Project description:Brown adipose tissue (BAT) plays an essential role in metabolic homeostasis by dissipating energy via thermogenesis through uncoupling protein 1 (Ucp1). Previously, we reported that the TATA-binding protein Associated Factor 7L (Taf7l) is an important regulator of white adipose tissue (WAT) differentiation. Here, we show that Taf7l also serves as a molecular switch between brown fat and muscle lineages in vivo and in vitro. In adipose tissue, Taf7l containing TFIID complexes associate with PPAR to mediate DNA looping between distal enhancers and core promoter elements. Our findings suggest that presence of the tissue-specific Taf7l subunit in TFIID functions to promote long-range chromatin interactions during BAT lineage specification. mRNA-seq expression profiling wild type and Taf7l knockout interscapular brown adipose tissue (BAT)

2014-06-03 | E-GEOD-55797 | biostudies-arrayexpress

Transcriptomic analysis of embryonic brown adipose tissue (BAT)

Project description:Transcriptomic analysis of embryonic brown adipose tissue (BAT)

| PRJNA504888 | ENA

Protein Acetylation and Succinylation in Brown Adipose Tissue

Project description:One-pot enrichment and label-free quantification of protein acetylation and protein succinylation in mouse brown adipose tissue (BAT) in response to cold-acclimation and/or BAT-specific Sirt5 KO.

2018-06-22 | MSV000082491 | MassIVE

PKGI KO vs. WT brown adipocytes and brown adipose tissues

Project description:Gene expression in brown adipose tissue and in primary adipocytes derived thereof from PKGI-/- mice was studied in comparison to wild type mice.

2009-05-16 | GSE16106 | GEO

Expression profile of BAT and gWAT from adipose tissue-specific Pgam1 deficient mice

Project description:To analyze the gene expression profile of BAT and gWAT from Pgam1 depletion mice, we performed whole genome microarray expression profiling using brown adipose tissue (BAT) and gonadal white adipose tissue (gWAT) from adipose tissue-specific Pgam1 knockout (KO) mice.

2022-04-11 | GSE186030 | GEO

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data