Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

ATACseq and RNAseq of mouse CD4 T cells

ABSTRACT: ATACseq and RNAseq of mouse CD4 T cells

PROVIDER: PRJNA766046 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Similar Datasets

RNAseq and ATACseq Analysis CD4+ T cells response to isoalloLCA treatment in vitro

Project description:RNAseq and ATACseq Analysis CD4+ T cells response to isoalloLCA treatment in vitro

| PRJNA685789 | ENA

Single nucleus multiome (RNAseq and ATACseq) of female mouse pituitary

Project description:We report the single nucleus multiome (RNAseq+ATACseq) of a female mouse pituitary sample. This dataset was generated for supporting the development of a data-driven batch inference method and transforms often heterogeneous data matrices obtained from different samples into a uniformly cell-type annotated and integrated dataset.

2024-10-01 | GSE244132 | GEO

Single nucleus multiome (RNAseq and ATACseq) of male mouse pituitary

Project description:Single nucleus multiome (RNAseq and ATACseq) of male mouse pituitary

| PRJNA983783 | ENA

Single nucleus multiome (RNAseq and ATACseq) of female mouse pituitary

Project description:Single nucleus multiome (RNAseq and ATACseq) of female mouse pituitary

| PRJNA1021495 | ENA

Single nucleus multiome (RNAseq and ATACseq) of male mouse pituitary

Project description:We report the single nucleus multiome (RNAseq+ATACseq) of a male mouse pituitary sample. This dataset was generated for supporting the development of a novel computational framework for analyzing gene regulatorty circuitry from single cell multiome datasets. This computational framework extract regulatory circuits consisting of TFs, cis-regulatory sites and target genes by modelling the co-incidence of the RNA levels of the TFs, the chomatin accessibility of the TFs' binding sites and the RNA levels of target genes across single cell. Specifically we identified gonadotrope-specific regulatory circuits under the transcription factor Gata2. These regulatory circuits were validated by male mouse pituitary samples with gonadotrope-conditional knockout of Gata2 previously reported in GSE190066.

2023-12-13 | GSE234943 | GEO

ATACseq Analysis CD4+ T cells response to isoalloLCA treatment in vitro

Project description:ATACseq Analysis CD4+ T cells response to isoalloLCA treatment in vitro

| PRJNA685793 | ENA

RNA-Seq of mouse CD4+ T cells to analyse CD4+ TERM cells

Project description:RNA-Seq of mouse CD4+ T cells to analyse CD4+ TERM cells

| PRJEB51485 | ENA

ATACseq of differentiating ATDC5 mouse prechondrocytes

Project description:ATACseq of differentiating ATDC5 mouse prechondrocytes

| PRJNA822947 | ENA

Mouse lung and brain LCM-ATACseq

Project description:Mouse lung and brain LCM-ATACseq