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ABSTRACT: Dendrobium officinale affect Mus musculus albus colonic contents Raw sequence reads

PROVIDER: PRJNA778606 | ENA |

REPOSITORIES: ENA

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Dataset's files

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			Action	DRS
	SRR16904735.fastq.gz	Fastqsanger.gz
	SRR16904736.fastq.gz	Fastqsanger.gz
	SRR16904737.fastq.gz	Fastqsanger.gz
	SRR16904738.fastq.gz	Fastqsanger.gz
	SRR16904739.fastq.gz	Fastqsanger.gz

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Comparative transcriptomic analysis reveal the regulation mechanism underlying MeJA-induced accumulation of alkaloids in Dendrobium officinale

Project description:Dendrobium officinale is a traditional medicinal herb with a mount of bioactive components. Alkaloid is one of the major active ingredients of Dendrobium plants, and its immune regulatory effects have been well-studied. A total of 4857 DEGs, including 2943 up- and 1932 down-regulated genes, were identified between the control and MeJA-treated groups. Several shikimate and methylerythritol 4-phosphate pathway genes and a number of MeJA-induced P450 family genes, aminotransferase genes and methyltransferase genes were identified, providing several important candidates to further elucidate the alkaloid biosynthetic pathway of D. officinale. Furthermore, a large number of MeJA-induced transcript factor encoding genes were identified, suggesting a complex genetic network affecting the alkaloid metabolism in D. officinale.

2019-01-07 | GSE124762 | GEO

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