Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

ABSTRACT: mice liver RNA-seq

PROVIDER: PRJNA810560 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR18148884.fastq.gz	Fastqsanger.gz
	SRR18148885.fastq.gz	Fastqsanger.gz
	SRR18148886.fastq.gz	Fastqsanger.gz
	SRR18148887.fastq.gz	Fastqsanger.gz
	SRR18148888.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 12

Similar Datasets

Mus musculus brown adipose tissue histone proteoforms

Project description:Histones were isolated from brown adipose tissue and liver from mice housed at 28, 22, or 8 C. Quantitative top- or middle-down approaches were used to quantitate histone H4 and H3.2 proteoforms. See published article for complimentary RNA-seq and RRBS datasets.

2023-06-05 | MSV000092105 | MassIVE

Mus musculus

Project description:C57BL/6 mice liver RNA-Seq

| PRJNA261365 | ENA

The mouse aging proteomic atlas

Project description:This database provides TMT-labeled proteomic data of aorta (thoracic aorta), brain, heart, kidney, liver, lung, muscle (gastrocnemius muscle), and skin (abdominal skin) of 6, 15, 24, and 30 months old male C57BL/6 mice. In addition to the whole-tissue lysate, low-soluble protein-enriched fraction was also analyzed for heart, kidney, lung, muscle, and skin. Bulk RNA-Seq data are available for brain, heart, kidney, liver, lung, muscle, and skin. The tissues used for transcriptomic analysis and proteomic analysis of whole-tissue lysate and low-soluble protein-enriched fraction were collected from the same mice. All analyses were conducted with 4 biological replicates.

2024-09-17 | PXD040722 | Pride

RNA-seq for liver tissue in mice

Project description:RNA-seq for liver tissue in mice

| PRJNA1103184 | ENA

Mus musculus

Project description:Mice liver RNA-Seq during Schistosoma japonicum infection

| PRJNA395089 | ENA

Project description:RNA-seq on Fructus Psoraleae-treated mice liver

| PRJNA1035563 | ENA

Diel multi-tissue genome-scale metabolic models of Vitis vinifera

Project description:The first GSSM of V. vinifera was reconstructed (MODEL2408120001). Tissue-specific models for stem, leaf, and berry of the Cabernet Sauvignon cultivar were generated from the original model, through the integration of RNA-Seq data. These models have been merged into diel multi-tissue models to study the interactions between tissues at light and dark phases.

2024-09-02 | MODEL2408160001 | BioModels

Project description:Circadian RNA-seq timeline for WT mice liver or mice with liver-specific KDM5A ablation

| PRJNA626351 | ENA

Genome-wide maps of BAF180 and REV-ERBÎ± binding

Project description:We generated genome-wide cistromes of BAF180 subunit of the SWI-SNF chromatin remodeling complex in mouse liver at CT10 and CT22. In addition, we performed ChIP-Seq analysis on REV-ERBÎ± in WT and SRC-2-/- mouse liver at CT10. We found circadian oscilation of BAF180 chromatin recruitment in mouse liver with peak recruitment at CT22 and nadir at CT10. Further,REV-ERBÎ± chromatin recruitment was significantly reduced in SRC-2-/- mouse liver compared to WT mice at CT10. ChIP-Seq for BAF180 was performed in WT mice liver at CT10 and CT22 using two different antibodies. ChIP-Seq for REV-ERBÎ± was performed in WT and SRC-2-/- mice in liver at CT10 with biological replicates.

2015-12-07 | E-GEOD-67852 | biostudies-arrayexpress

Project description:RNA-Seq of Flox and IRF6-HKO mice liver

| PRJNA522920 | ENA