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Genomic analysis of kidneys from male and female F1 Fischer F344 rats following dietary ochratoxin A exposure in utero and throughout development.

ABSTRACT: Genomic analysis of kidneys from male and female F1 Fischer F344 rats following dietary ochratoxin A exposure in utero and throughout development.

PROVIDER: PRJNA824493 | ENA |

REPOSITORIES: ENA

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			Action	DRS
	SRR18677700_1.fastq.gz	Fastqsanger.gz
	SRR18677700_2.fastq.gz	Fastqsanger.gz
	SRR18677800_1.fastq.gz	Fastqsanger.gz
	SRR18677800_2.fastq.gz	Fastqsanger.gz
	SRR18677900_1.fastq.gz	Fastqsanger.gz

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Project description:To provide insights into the mode of action for Ni3S2 lung carcinogenicity by examining gene expression changes in target cells after inhalation exposure. Gene expression changes were determined in micro-dissected lung broncho-alveolar cells from Fischer F344 rats following inhalation of Ni3S2 at 0.0, 0.04, 0.08, 0.15, and 0.60 mg/m3 (0.03, 0.06, 0.11, and 0.44 mg Ni/m3) for one and four weeks (6 hours per day, 5 days per week). Results: Broncho-alveolar lavage fluid evaluation and lung histopathology provided evidence of inflammation only at the two highest concentrations, which were similar to those tested in the 2-year bioassay. The number of statistically significant up- and down-regulated genes decreased markedly from one to four weeks of exposure, suggesting adaptation. Cell signal pathway enrichment at both time-points primarily reflected responses to toxicity, including inflammatory and proliferative signaling. While proliferative signaling was up-regulated at both time points, some inflammatory signaling reversed from down-regulation at 1 week to up-regulation at 4 weeks. Conclusions: These results support a mode of action for Ni3S2 carcinogenicity driven by chronic toxicity, inflammation and proliferation, leading to mis-replication, rather than by direct genotoxicity. Benchmark dose (BMD) analysis identified the lowest pathway transcriptional BMD exposure concentration as 0.026 mg Ni/m3, for apoptosis/survival signaling. When conducted on the basis of lung Ni concentration the lowest pathway BMD was 0.64 M-BM-5g Ni/g lung, for immune/inflammatory signaling. Implications: These highly conservative BMDs could be used to derive a point of departure in a nonlinear risk assessment for Ni3S2 toxicity and carcinogenicity. Gene expression changes were determined in micro-dissected lung broncho-alveolar cells from Fischer F344 rats following inhalation of Ni3S2 at 0.0, 0.04, 0.08, 0.15, and 0.60 mg/m3 (0.03, 0.06, 0.11, and 0.44 mg Ni/m3) for one and four weeks (6 hours per day, 5 days per week).

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Genomic analysis of kidneys from male and female F1 Fischer F344 rats following dietary ochratoxin A exposure in utero and throughout development.

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