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MRNA profiling in Ustilago maydis under RUS (repopulation/regrowth under starvation)

ABSTRACT: mRNA profiling in Ustilago maydis under RUS (repopulation/regrowth under starvation)

PROVIDER: PRJNA848199 | ENA |

REPOSITORIES: ENA

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			Action	DRS
	SRR19630046_1.fastq.gz	Fastqsanger.gz
	SRR19630046_2.fastq.gz	Fastqsanger.gz
	SRR19630047_1.fastq.gz	Fastqsanger.gz
	SRR19630047_2.fastq.gz	Fastqsanger.gz
	SRR19630048_1.fastq.gz	Fastqsanger.gz

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mRNA profiling in Ustilago maydis under RUS (repopulation/regrowth under starvation)

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Expression analysis of Pseudozyma antarctica T-34 and Ustilago maydis on different carbon source

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Transcriptomic analysis of basidiocarp development in Ustilago maydis (DC) Dcd

Project description:Study of gene regulation basidiocarps development in Ustilago maydis using transcriptomic analysis. In 2012, Cabrera-Ponce et al. established conditions allowing a completely different developmental program in U. maydis when grown on solid medium containing Dicamba (synthetic auxin) in dual cultures with maize embryogenic calli.

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Project description:Goals: Comparing the infection between Ustilago maydis SG200 with the wild-type strain FB1xFB2 previously published Methods: Comparative RNASeq analysis between U. maydis SG200 and U. maydis FB1xFB2 at three timepoints (axenic, 2dpi, 12dpi) Results: The RNASeq analysis in SG200 identifies differences in gene expression with FB1xFB2. These differences could be the result of a unequal contribution of each nuclei to transcription. Further analysis identified a set of differentially transcribed genes.

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