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Sesame

ABSTRACT: Comparative chloroplast genome study and phylogenetic relationships between cultivated and wild sesame species

PROVIDER: PRJNA860226 | ENA |

REPOSITORIES: ENA

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			Action	DRS
	SRR21022188_1.fastq.gz	Fastqsanger.gz
	SRR21022188_2.fastq.gz	Fastqsanger.gz
	SRR21022189.fastq.gz	Fastqsanger.gz
	SRR21022189_1.fastq.gz	Fastqsanger.gz
	SRR21022189_2.fastq.gz	Fastqsanger.gz

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Project description:Sesame seeds is an important traditional crop with high oil content and other abundant nutrients which are very beneficial for diet and health of human being. However, the molecular mechanism for metabolite accumulation, especially for oil and phenylpropanoid biosynthesis, is still not very clear in sesame. In this study, the transcriptome profiles of black and white sesame seeds were compared by RNA-sequencing. Transcriptome analysis showed that the expression patterns of genes encoding phenylpropanoid pathway enzymes were different between the two sesame cultivars. Compared with white sesame, most of genes involved in oil biosynthesis were significantly down-regulated in black sesame.

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Project description:Transcriptome analysis was performed on young leaves from 17-day old sesame seedling. The experiment aimed to shed light on the polar regulatory gene network in sesame under KANADI1 loss of function and identify candidate genes underlie the hyponastic leaf phenotype. We compaired between homozygous lines for either SiCD-A allele contains KAN1 (WT) or SiCD-B allele contains kan1 (mutant) on S.indicum LG8.

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