Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Hyalomma sp.

ABSTRACT: The transcriptomes of ticks in northwest China for virus discovery

PROVIDER: PRJNA871396 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR21151074_1.fastq.gz	Fastqsanger.gz
	SRR21151074_2.fastq.gz	Fastqsanger.gz
	SRR21151075_1.fastq.gz	Fastqsanger.gz
	SRR21151075_2.fastq.gz	Fastqsanger.gz
	SRR21151076_1.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 16

Similar Datasets

Project description:The transcriptomes of ticks for virus discovery

| PRJNA714800 | ENA

Global transcriptome analysis of gene expression changes in Mesorhizobium alhagi CCNWXJ12-2 under salt stress

2014-05-06 | GSE57306 | GEO

Expressional profile of liver of CGMCC No.8730 Eurotium cristatum fermented dark tea fed high-fat diet rats

Project description:Microbial fermentation is involved in the processing of a dark tea popular for centuries in Northwest China which has shown many health benefits. This study will examine anti-obesity, hyperlipidemic and hyperglycemic effects of CGMCC No.8730 Eurotium cristatum (EC) fermented dark tea (8730DT).

2019-07-14 | GSE84496 | GEO

Global transcriptome analysis of gene expression changes in Mesorhizobium alhagi CCNWXJ12-2 under salt stress

Project description:Analysis of gene expression changes of Mesorhizobium alhagi CCNWXJ12-2 under high salt stress. Mesorhizobium alhagi CCNWXJ12-2 is isolated from Alhagi sparsifolia in northwest of China. Total RNA extracted from Mesorhizobium alhagi CCNWXJ12-2 growing in TY medium containing 0.4 M NaCl and 0 M NaCl.

2014-05-06 | E-GEOD-57306 | biostudies-arrayexpress

Project description:Metagenomics of ticks from Xinjiang Province for virus discovery

| PRJNA480774 | ENA

Induction and suppression of Haemaphysalis longicornis ticks antiviral RNA interference responses by arthropod-borne RNA viruses (RNA-Seq)

Project description:Severe fever with thrombocytopenia syndrome virus (SFTSV) is an emerging tick-borne bunyavirus that causes severe clinical symptoms and mortality in humans. Haemaphysalis longicornis tick has been identified as the competent vector for SFTSV transmission. Although antiviral RNA interference (RNAi) in insects has been well documented, the degree to which RNAi contributes to antiviral defense in ticks is still largely elusive. In this study, utilizing arthropod-borne RNA viruses, including SFTSV, we find abundant virus-derived small interfering RNAs (vsiRNAs) are induced in H. longicornis after infection through either microinjection or natural blood-feeding. Furthermore, we identify a Dicer2-like homolog, the core protein of antiviral RNAi pathway, in H. longicornis and knocking down this gene exacerbated virus amplification. To counteract this antiviral RNAi of ticks, viruses have evolved suppressors of RNAi (VSRs). Here, we show that reduced viral replication inversely correlated with the accumulation of vsiRNAs in ticks after infection with recombinant sindbis virus (SINV) expressing heterologous VSR proteins. Elucidating the antiviral RNAi pathway of ticks by model arthropod-borne RNA viruses in vivo is critical to understanding the virus-host interaction, providing a feasible intervention strategy to control tick-borne arbovirus transmission.

2024-01-16 | GSE165139 | GEO

Project description:The transcriptomes of rodent for virus discovery

| PRJNA1079226 | ENA

Project description:The transcriptomes of rodent for virus discovery

| PRJNA838119 | ENA

The genetic ancestry of modern Indus Valley populations from Northwest India

Project description:We genotyped 45 new samples from 4 populations of Northwest India and combined it with previously published data to characterize the population structure of modern Northwest Indian populations in the context of their geographic neighbors across South Asia and West Eurasia.

2018-12-05 | GSE119653 | GEO

Project description:desert farmland in Northwest China

| PRJNA983930 | ENA