Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

ABSTRACT: Nitrogen Fertilization and Mycorrhiza

PROVIDER: PRJNA995554 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR25435300_1.fastq.gz	Fastqsanger.gz
	SRR25435300_2.fastq.gz	Fastqsanger.gz
	SRR25435400_1.fastq.gz	Fastqsanger.gz
	SRR25435400_2.fastq.gz	Fastqsanger.gz
	SRR25435500_1.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 968

Similar Datasets

DUAL RNASeq ANALYSIS REVEALS AN INCREASE OF FUNGAL PATHOGENICITY FUNCTIONS AND A ROLE OF PLANT GLUTAMINE SYNTHETASE IN NITROGEN-INDUCED SUSCEPTIBILITY TO THE RICE BLAST FUNGUS

Project description:In order to understand the mechanisms of Nitrogen induced susceptibility (NIS) we’ve conducted a dual RNAseq experiment on rice infected tissues by Magnaporthe oryzae. At 0 day post inoculation and 2 days post inoculation tissues have been collected on mock inoculated and M. oryzae inoculated plants. Rice were conducted under two type of nitrogen fertilization: 0N all fertilization but nitrogen, 1N all fertilization and NH4NO3. The fertilization was applied one day before inoculation. RNAseq was conducted both on rice and fungal RNA.

2016-10-31 | GSE83219 | GEO

Transcription profiling of Zea mays leaves from variety Helen grown in agricultural fields at 2 levels of nitrogen fertilization

Project description:Comparison of the transcriptome profiles of a widely commercialized maize variety (Helen) at two levels of nitrogen fertilization. Conventional nitrogen fertilization compared to not nitrogen fertilization during the season.

2010-09-21 | E-MEXP-2367 | biostudies-arrayexpress

Transcription profiling of Zea mays leaves from variety MON810 (Helen Bt) grown in agricultural fields at 2 levels of nitrogen fertilization

Project description:Comparison of the transcriptome profiles of a widely commercialized MON810 maize variety (HelenBt) at two levels of nitrogen fertilization. Variety Helen Bt; obtained by Advanta; authorized the 11/08/2005; now commercialized by Limagrain Iberica. Conventional nitrogen fertilization compared to not nitrogen fertilization during the season.

2010-09-21 | E-MEXP-2368 | biostudies-arrayexpress

soil metagenome

Project description:nitrogen fertilization Raw sequence reads

| PRJNA353163 | ENA

Project description:Straw returning and nitrogen fertilization

| PRJNA803963 | ENA

Project description:Microbial community response to nitrogen fertilization

| PRJNA664091 | ENA

Project description:Agricultural soils with reduced nitrogen fertilization

| PRJNA860158 | ENA

Ethylene and jasmonic acid act as negative modulators during mutualistic symbiosis between Laccaria bicolor and Populus roots

Project description:The Poplar transcriptome was analyzed in mycorrhizal root tips in contact with Laccaria bicolor for 2 weeks. During mycorrhization the roots were treated with either 250M-BM-5m ACC, 10nM JA or 500M-BM-5M SA and compared to untreated mycorrhiza or control roots without contact to L. bicolor. In addition the poplar mutants 35S::PttACO1 and 35S::Atetr1 were used We performed 27 hybridizations (NimbleGen) with samples derived from Populus tremula x Populus alba clone 717-1B4 control roots, untreated mycorrhiza, SA-treated mycorrhiza, ACC-treated mycorrhiza and JA-treated mycorrhiza (3 biological replicates each) as well as Populus tremula x Populus tremuloides T89 control roots, mycorrhiza, 35S::PttACO1 mycorrhiza and 35S::Atetr1-1 mycorrhiza (3 biological replicates). All samples were labeled with Cy3.

2013-12-19 | E-GEOD-53475 | biostudies-arrayexpress

Small RNA sequencing in tomato roots with and without Rhizophagus irregularis

Project description:Arbuscular mycorrhizal symbiosis is a predominant relationship between plant and arbuscular mycorrhizal fungi. To idendify arbuscular mycorrhiza responsive miRNAs, small RNA libraries were constructed in tomato roots colonized with Rhizophagus irregularis and without Rhizophagus irregularis. We identify miRNAs in tomato roots and provide a new profile of tomato miRNAs. And we found that some miRNAs were responsive to arbuscular mycorrhiza by comparing miRNAs in treatment with that in control.

2016-07-20 | GSE76204 | GEO

RNA-seq analysis to identify Tricholoma matsutake mycorrhiza specific gene

Project description:Bioproject:PRJNA509493; Biosample:SAMN10583662; To identify T. matsutake mycorrhiza specific gene, transcriptomes were comapred among mycorrhiza (pine with T. matsutake), T. matsutake mycelia, T. matsutake fruiting body and pine root (without T. matsutake)

2019-09-02 | GSE128059 | GEO

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data