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We analyzed 143 E. coli ribosomal structures, mapping a total of 10,771 intramolecular distances for 126 cross-link-pairs and 3,405 intermolecular distances for 97 protein pairs. Our study might serve as benchmark for conducting biochemical experiments on newly modeled protein regions, guided by XL-M...
ORGANISM(S): Escherichia Coli 
2020-08-13 | PXD018935 | Pride
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This project reanalzyes data from 4 other projects. Information about the samples can be found i...
.... Isserlin, S. Jain, et al. A draft map of the human proteome. Nature, 509(7502):575–581, 2014. Hansjrg G ̋tzke, Claudio Muheim, A.F. Maarten Altelaar, Albert J.R. Heck, Gianluca Maddalo, and Daniel O. Daley. Identification of putative substrates for the periplasmic chaperone yfgm in Escherichia coli using quantitative proteomics. Molecular & Cellular Proteomics, 14(1):216–226, 2015.
ORGANISM(S): Homo Sapiens (human) Escherichia Coli Plasmodium Falciparum (isolate 3d7) 
2018-09-19 | PXD009265 | Pride
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Proteomics study on the periplasmic chaperone network in Escherichia coli
ORGANISM(S): Escherichia Coli 
2014-12-12 | PXD000814 | Pride
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Not available
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Cut-out switch model Membrane identity and GTPase cascades regulated by toggle and cut-out switches Perla Del Conte-Zerial, Lutz Brusch, Jochen C Rink, Claudio Collinet, Yannis Kalaidzidis, Marino Zerial, and Andreas Deutsch: ...
2024-09-02 | BIOMD0000000174 | BioModels
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Ribosomal protein S19 (RPS19) is a 16-kDa protein found mainly as a component of the ribosomal 40 S subunit. Its mutations are responsible for Diamond Blackfan anemia, a congenital disease characterized by defective erythroid progenitor maturation. To clarify the function of RPS19, we compare the int...
ORGANISM(S): Homo Sapiens (human) 
2014-08-11 | PXD000640 | Pride
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HLA class I (HLA-I) molecules play a central role for both NK and T-cell responses that prevent serious human cytomegalovirus (HCMV) disease. To create opportunities for viral spread, multifaceted HCMV-encoded immunoevasins target HLA-I. Among these, the glycoprotein US10 is so far insufficiently stu...
ORGANISM(S): Homo Sapiens (human) 
2024-07-03 | PXD051190 | Pride
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Macrophage multinucleation (MM) is essential for various biological processes such as osteoclast-mediated bone resorption and multinucleated giant cell-associated inflammatory reactions. Here we study the molecular pathways underlying multinucleation in the rat through an integrative approach combini...
ORGANISM(S): Rattus Norvegicus (rat) 
2016-07-06 | PXD001269 | Pride
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Not available
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Schizophrenia (SCHZ) and tobacco misuse comorbidity is frequently established during adolescence. However, comorbidity markers are still missing. Here, we used an label free quantitative proteomics approach to identify exclusively deregulated proteins in male and female mice modeled to SCHZ with a hi...
ORGANISM(S): Mus Musculus (mouse) 
2023-10-24 | PXD043626 | Pride
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