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GenomicsA Genomic History of Aboriginal Australia
The population history of Aboriginal Australians remains largely uncharacterised. We generated high-coverage genomes for 83 Aboriginal Australians (speakers of Pama-Nyungan languages) and 25 Papuans from the New Guinea Highlands. We find that Papuan and Aboriginal Australian ancestors diversified 25-...
EGAS00001001766 | EGA
0
Genomics37a30206-29b3-47a0-90c4-eee326fe5b8b - samples
Genotype calls for 83 Aboriginal Australian genomes split by chromosomes. In short, genotypes were called individually with samtools. They were subsequently filtered with thresholds related to sequencing depth, location of variants, sequencing error, and strand bias. Once combined, the genotypes were...
EGAD00001004155 | EGA
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GenomicsRFMix
This dataset contains the per-chromosome RFMix input and output files for the local ancestry inference of 59 Aboriginal Australian genomes as reported in Malaspinas et al., 2016. Local ancestry was inferred assuming four mixing ancestral populations represented by: Europeans (27 individuals), Asians ...
EGAD00010001575 | EGA
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GenomicsMT alignment
Alignement including 83 MT AA sequences and 2 reference sequences, rCRS and RSRS
EGAD00010001574 | EGA
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GenomicsY chromosome alignment
Variations on the Y chromosome from 44 samples
EGAD00010001573 | EGA
0
Genomicsena-DATASET-UNIBE-07-04-2016-07:41:15:505-596 - samples
Mapped data (bam files) for high-throughput whole genome sequence data for 83 modern Aboriginal Australians
EGAD00001002001 | EGA
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GenomicsAboriginal Australia Genome Consortium
Data Access Committee EGAC00001000465
EGAC00001000465 | EGA
1K
OtherUNIBE
Organisation EGAO00000000725
EGAO00000000725 | EGA
1K
OtherGriffith University
Organisation EGAO00000000728
EGAO00000000728 | EGA
1K
OtherUniversity of Copenhagen
Organisation EGAO00000000727
EGAO00000000727 | EGA
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