Unknown,Transcriptomics,Genomics,Proteomics

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MicroRNA expression in human hepatitis c virus (HCV) liver biopsy samples


ABSTRACT: In order to infer the inverse expression relationships between microRNAs and mRNAs during HCV infection, we profiled both microRNA and mRNA expressions in HCV positive (HCV+) and HCV negative (HCV-) human liver biopsy tissue samples. This series includes all microRNA profiles. This series includes microRNA profiles of 36 samples, 24 HCV positives and 12 HCV negatives.

ORGANISM(S): Homo sapiens

SUBMITTER: Elizabeth Rosenzweig 

PROVIDER: E-GEOD-15288 | biostudies-arrayexpress |

REPOSITORIES: biostudies-arrayexpress

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Publications

Computational identification of hepatitis C virus associated microRNA-mRNA regulatory modules in human livers.

Peng Xinxia X   Li Yu Y   Walters Kathie-Anne KA   Rosenzweig Elizabeth R ER   Lederer Sharon L SL   Aicher Lauri D LD   Proll Sean S   Katze Michael G MG  

BMC genomics 20090811


<h4>Background</h4>Hepatitis C virus (HCV) is a major cause of chronic liver disease by infecting over 170 million people worldwide. Recent studies have shown that microRNAs (miRNAs), a class of small non-coding regulatory RNAs, are involved in the regulation of HCV infection, but their functions have not been systematically studied. We propose an integrative strategy for identifying the miRNA-mRNA regulatory modules that are associated with HCV infection. This strategy combines paired expressio  ...[more]

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