Unknown,Transcriptomics,Genomics,Proteomics

Dataset Information

0

Effect of CovR polymorphisms on GAS gene expression


ABSTRACT: In this study we sought to determine the effects of single amino acid replacements in the control of virulence regulatory (CovR) regulatory protein on group A streptococcal global gene expression. We compared the transcriptomes of the serotype M3 strain MGAS10870 with four derivative strains: 1) a strain in which CovR had been completely inactivated (CovR knockout); 2) a strain in which the Arg 144 amino acid was changed to a cysteine (CovR-R144C); 3) a strain in which the Arg 158 amino acid was changed to a cysteine (CovR-R158C); and 4) a strain in which the the Asn 193 amino acid was changed to an isoleucine (CovR-N193I). Duplicate samples of each strain were grown to mid-exponential phase and the relative transcriptomes were compared using an Affymetrix GeneChipl.

ORGANISM(S): Streptococcus pyogenes

SUBMITTER: Samuel Shelburne 

PROVIDER: E-GEOD-32106 | biostudies-arrayexpress |

REPOSITORIES: biostudies-arrayexpress

Similar Datasets

2022-01-03 | GSE192795 | GEO
2015-01-24 | E-GEOD-65226 | biostudies-arrayexpress
2010-05-06 | E-GEOD-20212 | biostudies-arrayexpress
2011-11-01 | GSE32106 | GEO
2008-12-01 | GSE9825 | GEO
2008-06-16 | E-GEOD-9517 | biostudies-arrayexpress
2015-01-24 | GSE65226 | GEO
2007-12-13 | GSE9517 | GEO
2012-07-23 | E-GEOD-35323 | biostudies-arrayexpress
2016-06-26 | E-GEOD-70307 | biostudies-arrayexpress