Unknown,Transcriptomics,Genomics,Proteomics

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Transcription profiling of mouse strains (10) across 7 brain regions


ABSTRACT: Survey of gene expression in ten common inbred strains of laboratory mouse. Seven brain regions examined: amygdala, basal ganglia, cerebellum, frontal cortex, hippocampus, cingulate cortex, olfactory bulb. Experiment Overall Design: Tissue from three animals was pooled on each array. Three biological replicates per strainxregion condition. Animals were 4-5 weeks of age.

ORGANISM(S): Mus musculus

SUBMITTER: Jessica Nadler 

PROVIDER: E-GEOD-5055 | biostudies-arrayexpress |

REPOSITORIES: biostudies-arrayexpress

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Publications

Large-scale gene expression differences across brain regions and inbred strains correlate with a behavioral phenotype.

Nadler Jessica J JJ   Zou Fei F   Huang Hanwen H   Moy Sheryl S SS   Lauder Jean J   Crawley Jacqueline N JN   Threadgill David W DW   Wright Fred A FA   Magnuson Terry R TR  

Genetics 20060915 3


Behaviors are often highly heritable, polygenic traits. To investigate molecular mediators of behavior, we analyzed gene expression patterns across seven brain regions (amygdala, basal ganglia, cerebellum, frontal cortex, hippocampus, cingulate cortex, and olfactory bulb) of 10 different inbred mouse strains (129S1/SvImJ, A/J, AKR/J, BALB/cByJ, BTBR T+ tf/J, C3H/HeJ, C57BL/6J, C57L/J, DBA/2J, and FVB/NJ). Extensive variation was observed across both strain and brain region. These data provide po  ...[more]

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